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一种潜在的生物防治剂——内生菌YB - 130的分离、鉴定及全基因组组装

Isolation, Identification, and Complete Genome Assembly of an Endophytic YB-130, Potential Biocontrol Agent Against .

作者信息

Xu Wen, Zhang Liyong, Goodwin Paul H, Xia Mingcong, Zhang Jie, Wang Qi, Liang Juan, Sun Runhong, Wu Chao, Yang Lirong

机构信息

Institute of Plant Protection Research, Henan Academy of Agricultural Sciences, Henan Biopesticide Engineering Research Center, Henan International Joint Laboratory of Crop Protection, Zhengzhou, China.

College of Life Sciences, Henan Agricultural University, Zhengzhou, China.

出版信息

Front Microbiol. 2020 Dec 3;11:598285. doi: 10.3389/fmicb.2020.598285. eCollection 2020.

DOI:10.3389/fmicb.2020.598285
PMID:33343540
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7744476/
Abstract

Wheat scab caused by is a highly destructive disease that leads to yield reduction and mycotoxin contamination of grains. In this study, an endophytic bacterium of strain YB-130 was isolated from surface sterilized wheat spikes with scab symptoms and identified as by whole genome annotation, 16S rRNA gene and average nucleotide identities analysis. The whole-genome sequence of strain YB-130 was obtained by PacBio sequencing. 88 putative Carbohydrate-Active Enzymes and 12 gene clusters encoding for secondary metabolites were identified in the YB-130 genome, including one gene cluster for the synthesis of lanthipeptide only found in strain YB-130 genome. In dual cultures, strain YB-130 significantly inhibited the growth of PH-1 and other eight fungal plant pathogens, indicating a broad antifungal activity. Furthermore, strain YB-130 was able to significantly inhibit spore morphology and hyphal development of PH-1. Strain YB-130 also reduced deoxynivalenol production by PH-1 in dual cultures, possibly due to its ability to suppress the expression of , , and that are required for deoxynivalenol production in . Overall, YB-130 is a promising biological control agent of both infection and mycotoxin production.

摘要

由[病原菌名称缺失]引起的小麦赤霉病是一种极具破坏性的病害,会导致产量下降和谷物被霉菌毒素污染。在本研究中,从表面消毒的患有赤霉病症状的小麦穗中分离出内生细菌菌株YB - 130,并通过全基因组注释、16S rRNA基因和平均核苷酸同一性分析将其鉴定为[细菌名称缺失]。菌株YB - 130的全基因组序列通过PacBio测序获得。在YB - 130基因组中鉴定出88个推定的碳水化合物活性酶和12个编码次生代谢产物的基因簇,其中包括一个仅在菌株YB - 130基因组中发现的用于合成羊毛硫肽的基因簇。在共培养中,菌株YB - 130显著抑制了[病原菌名称缺失]PH - 1和其他八种植物病原真菌的生长,表明其具有广泛的抗真菌活性。此外,菌株YB - 130能够显著抑制[病原菌名称缺失]PH - 1的孢子形态和菌丝发育。在共培养中,菌株YB - 130还降低了[病原菌名称缺失]PH - 1的脱氧雪腐镰刀菌烯醇产量,这可能是由于其能够抑制[病原菌名称缺失]中脱氧雪腐镰刀菌烯醇产生所需的[相关基因名称缺失]、[相关基因名称缺失]和[相关基因名称缺失]的表达。总体而言,YB - 130是一种有潜力的防治[病原菌名称缺失]感染和霉菌毒素产生的生物防治剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/714bcf2d5baf/fmicb-11-598285-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/f65f837d7c34/fmicb-11-598285-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/58e6cab1916d/fmicb-11-598285-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/0746e5c3bd1d/fmicb-11-598285-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/abb337e09a2b/fmicb-11-598285-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b22793cfb489/fmicb-11-598285-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b932f7ebd016/fmicb-11-598285-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b48af43f6b9c/fmicb-11-598285-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/714bcf2d5baf/fmicb-11-598285-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/f65f837d7c34/fmicb-11-598285-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/58e6cab1916d/fmicb-11-598285-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/0746e5c3bd1d/fmicb-11-598285-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/abb337e09a2b/fmicb-11-598285-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b22793cfb489/fmicb-11-598285-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b932f7ebd016/fmicb-11-598285-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/b48af43f6b9c/fmicb-11-598285-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c78/7744476/714bcf2d5baf/fmicb-11-598285-g008.jpg

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