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HEP N 核糖核酸酶——一类具有不同功能的新兴 RNA 加工和降解酶。

HEPN RNases - an emerging class of functionally distinct RNA processing and degradation enzymes.

机构信息

Department of Health and Human Services, Signal Transduction Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA.

出版信息

Crit Rev Biochem Mol Biol. 2021 Feb;56(1):88-108. doi: 10.1080/10409238.2020.1856769. Epub 2020 Dec 22.

DOI:10.1080/10409238.2020.1856769
PMID:33349060
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7856873/
Abstract

HEPN (Higher Eukaryotes and Prokaryotes Nucleotide-binding) RNases are an emerging class of functionally diverse RNA processing and degradation enzymes. Members are defined by a small α-helical bundle encompassing a short consensus RNase motif. HEPN dimerization is a universal requirement for RNase activation as the conserved RNase motifs are precisely positioned at the dimer interface to form a composite catalytic center. While the core HEPN fold is conserved, the organization surrounding the HEPN dimer can support large structural deviations that contribute to their specialized functions. HEPN RNases are conserved throughout evolution and include bacterial HEPN RNases such as CRISPR-Cas and toxin-antitoxin associated nucleases, as well as eukaryotic HEPN RNases that adopt large multi-component machines. Here we summarize the canonical elements of the growing HEPN RNase family and identify molecular features that influence RNase function and regulation. We explore similarities and differences between members of the HEPN RNase family and describe the current mechanisms for HEPN RNase activation and inhibition.

摘要

HEPN(高等真核生物和原核生物核苷酸结合)RNases 是一类新兴的具有多种功能的 RNA 加工和降解酶。该家族的成员由一个包含短共识 RNase 基序的小型 α-螺旋束定义。HEPN 二聚化是 RNase 激活的普遍要求,因为保守的 RNase 基序精确地位于二聚体界面上,形成一个复合催化中心。虽然核心 HEPN 折叠是保守的,但围绕 HEPN 二聚体的组织可以支持大的结构偏差,从而有助于它们的特殊功能。HEPN RNases在进化过程中是保守的,包括细菌 HEPN RNases,如 CRISPR-Cas 和毒素-抗毒素相关核酸酶,以及采用大型多组分机器的真核 HEPN RNases。在这里,我们总结了不断发展的 HEPN RNase 家族的典型元件,并确定了影响 RNase 功能和调节的分子特征。我们探讨了 HEPN RNase 家族成员之间的相似性和差异,并描述了 HEPN RNase 激活和抑制的当前机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/b3e29110a998/nihms-1661536-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/b06a8355027a/nihms-1661536-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/778be10bcc79/nihms-1661536-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/75cea2677f7c/nihms-1661536-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/387134fb9d71/nihms-1661536-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/0ab9e2d5bf0f/nihms-1661536-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/b3e29110a998/nihms-1661536-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/b06a8355027a/nihms-1661536-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/778be10bcc79/nihms-1661536-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/75cea2677f7c/nihms-1661536-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/387134fb9d71/nihms-1661536-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/0ab9e2d5bf0f/nihms-1661536-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/973f/7856873/b3e29110a998/nihms-1661536-f0006.jpg

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本文引用的文献

1
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Cell. 2021 Jan 21;184(2):323-333.e9. doi: 10.1016/j.cell.2020.12.001. Epub 2020 Dec 4.
2
Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2.SARS-CoV-2 的简化失活动化、扩增和 Cas13 检测。
Nat Commun. 2020 Nov 20;11(1):5921. doi: 10.1038/s41467-020-19097-x.
3
Novel polyadenylylation-dependent neutralization mechanism of the HEPN/MNT toxin/antitoxin system.新型 HEPN/MNT 毒素/抗毒素系统依赖 polyadenylylation 的中和机制。
Nucleic Acids Res. 2020 Nov 4;48(19):11054-11067. doi: 10.1093/nar/gkaa855.
4
Clinical validation of a Cas13-based assay for the detection of SARS-CoV-2 RNA.基于 Cas13 的 SARS-CoV-2 RNA 检测 assay 的临床验证。
Nat Biomed Eng. 2020 Dec;4(12):1140-1149. doi: 10.1038/s41551-020-00603-x. Epub 2020 Aug 26.
5
A phage-encoded anti-CRISPR enables complete evasion of type VI-A CRISPR-Cas immunity.一种噬菌体编码的抗 CRISPR 蛋白使 CRISPR-Cas 型 VI-A 免疫系统完全失效。
Science. 2020 Jul 3;369(6499):54-59. doi: 10.1126/science.abb6151. Epub 2020 May 28.
6
Type I and Type III Interferons - Induction, Signaling, Evasion, and Application to Combat COVID-19.I 型和 III 型干扰素 - 诱导、信号转导、逃逸及其在抗击 COVID-19 中的应用。
Cell Host Microbe. 2020 Jun 10;27(6):870-878. doi: 10.1016/j.chom.2020.05.008. Epub 2020 May 27.
7
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8
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9
Massively multiplexed nucleic acid detection with Cas13.基于 Cas13 的大规模多重核酸检测
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10
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Nat Commun. 2020 Mar 27;11(1):1596. doi: 10.1038/s41467-020-15334-5.