Systems Biology Group Lab, Department of Experimental Medicine, Sapienza University, Rome, Italy.
Department of Public Health and Infectious Diseases (Biostatistics Section), Sapienza University, Rome, Italy.
Sci Rep. 2020 Dec 22;10(1):22365. doi: 10.1038/s41598-020-79039-x.
COVID-19 pandemic in Italy displayed a spatial distribution that made the tracking of its time course quite difficult. The most relevant anomaly was the marked spatial heterogeneity of COVID-19 diffusion. Lombardia region accounted for around 60% of fatal cases (while hosting 15% of Italian population). Moreover, 86% of fatalities concentrated in four Northern Italy regions. The 'explosive' outbreak of COVID-19 in Lombardia at the very beginning of pandemic fatally biased the R-like statistics routinely used to control the disease dynamics. To (at least partially) overcome this bias, we propose a new index RI = dH/dI (daily derivative ratio of H and I, given H = Healed and I = Infected), corresponding to the ratio between healed and infected patients relative daily changes. The proposed index is less flawed than R by the uncertainty related to the estimated number of infected persons and allows to follow (and possibly forecast) epidemic dynamics in a largely model-independent way. To analyze the dynamics of the epidemic, starting from the beginning of the virus spreading-when data are insufficient to make an estimate by adopting SIR model-a "sigmoidal family with delay" logistic model was introduced. That approach allowed in estimating the epidemic peak using the few data gathered even before mid-March. Based on this analysis, the peak was correctly predicted to occur by end of April. Analytical methodology of the dynamics of the epidemic we are proposing herein aims to forecast the time and intensity of the epidemic peak (forward prediction), while allowing identifying the (more likely) beginning of the epidemic (backward prediction). In addition, we established a relationship between hospitalization in intensive care units (ICU) versus deaths daily rates by avoiding the necessity to rely on precise estimates of the infected fraction of the population The joint evolution of the above parameters over time allows for a trustworthy and unbiased estimation of the dynamics of the epidemic, allowing us to clearly detect the qualitatively different character of the 'so-called' second wave with respect to the previous epidemic peak.
意大利的 COVID-19 大流行呈现出一种空间分布,使得对其时间进程的跟踪变得非常困难。最显著的异常是 COVID-19 扩散的明显空间异质性。伦巴第大区占死亡病例的 60%左右(而该大区仅占意大利人口的 15%)。此外,86%的死亡病例集中在意大利北部的四个地区。大流行初期 COVID-19 在伦巴第大区的“爆发式”蔓延严重偏向了用于控制疾病动态的常规 R 类统计数据。为了(至少部分)克服这种偏差,我们提出了一个新的指数 RI=dH/dI(给定 H=已治愈和 I=已感染的每日衍生比率),对应于已治愈和已感染患者的相对每日变化的比率。与与估计的感染人数相关的不确定性相比,所提出的指数对 R 类统计数据的缺陷较小,并且允许以基本独立于模型的方式来跟踪(并可能预测)疫情动态。为了分析疫情的动态,从病毒传播开始时就开始分析(此时采用 SIR 模型进行估计的数据不足),引入了一个带有滞后的“Sigmoidal Family”逻辑模型。该方法允许使用甚至在三月中旬之前收集到的少量数据来估计疫情高峰期。根据该分析,正确预测疫情高峰期将在四月底出现。本文提出的疫情动态分析方法旨在预测疫情高峰期的时间和强度(向前预测),同时允许识别疫情的(更可能)开始(向后预测)。此外,我们通过避免依赖对感染人群比例的精确估计,建立了重症监护病房(ICU)住院人数与每日死亡率之间的关系。随着时间的推移,上述参数的共同演变允许对疫情动态进行可靠和无偏差的估计,使我们能够清楚地检测到相对于前一个疫情高峰期,所谓的“第二波”疫情具有不同的性质。