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生成 O-连接糖基化转移酶四肽重复结构域的相互作用组表明该酶在智力障碍中的作用。

Generation of an Interactome for the Tetratricopeptide Repeat Domain of O-GlcNAc Transferase Indicates a Role for the Enzyme in Intellectual Disability.

机构信息

Department of Biochemistry and Molecular Biology, Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30605, United States.

出版信息

J Proteome Res. 2021 Feb 5;20(2):1229-1242. doi: 10.1021/acs.jproteome.0c00604. Epub 2020 Dec 28.

Abstract

The O-GlcNAc transferase (OGT) modifies nuclear and cytoplasmic proteins with β--acetyl-glucosamine (O-GlcNAc). With thousands of O-GlcNAc-modified proteins but only one OGT encoded in the mammalian genome, a prevailing question is how OGT selects its substrates. Prior work has indicated that the tetratricopeptide repeat (TPR) domain of OGT is involved in substrate selection. Furthermore, several variants of OGT causal for X-linked intellectual disability (XLID) occur in the TPR domain. Therefore, we adapted the BioID labeling method to identify interactors of a TPR-BirA* fusion protein in HeLa cells. We identified 115 interactors representing known and novel O-GlcNAc-modified proteins and OGT interactors (raw data deposited in MassIVE, Dataset ID MSV000085626). The interactors are enriched in known OGT processes (e.g., chromatin remodeling) as well as processes in which OGT has yet to be implicated (e.g., pre-mRNA processing). Importantly, the identified TPR interactors are linked to several disease states but most notably are enriched in pathologies featuring intellectual disability that may underlie the mechanism by which mutations in lead to XLID. This interactome for the TPR domain of OGT serves as a jumping-off point for future research exploring the role of OGT, the TPR domain, and its protein interactors in multiple cellular processes and disease mechanisms, including intellectual disability.

摘要

O-连接的 N-乙酰葡萄糖胺转移酶(OGT)通过β-N-乙酰葡萄糖胺(O-GlcNAc)修饰核内和细胞质蛋白。由于哺乳动物基因组中只编码了一个 OGT,但有数千种 O-GlcNAc 修饰蛋白,因此一个普遍的问题是 OGT 如何选择其底物。先前的工作表明,OGT 的四肽重复(TPR)结构域参与了底物选择。此外,几种导致 X 连锁智力障碍(XLID)的 OGT 变体发生在 TPR 结构域。因此,我们采用了 BioID 标记方法来鉴定 HeLa 细胞中 TPR-BirA*融合蛋白的相互作用蛋白。我们鉴定了 115 个相互作用蛋白,代表已知和新的 O-GlcNAc 修饰蛋白和 OGT 相互作用蛋白(原始数据已在 MassIVE 中存档,数据集 ID MSV000085626)。这些相互作用蛋白富集在已知的 OGT 过程(如染色质重塑)以及尚未涉及 OGT 的过程(如前体 mRNA 处理)中。重要的是,鉴定出的 TPR 相互作用蛋白与几种疾病状态有关,但最显著的是与智力障碍相关的疾病状态有关,这可能是导致 XLID 的突变的机制。该 OGT 的 TPR 结构域的相互作用组为未来探索 OGT、TPR 结构域及其蛋白相互作用在多种细胞过程和疾病机制中的作用提供了起点,包括智力障碍。

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