Wang Yi, Yuan Xiaolong, Chen Zhonghua, Luo Ting
Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming Yunnan, People's Republic of China.
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2403-2404. doi: 10.1080/23802359.2019.1636727.
is an important economical tree in Africa. In this study, the complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data. The cpDNA is 159,725 bp in length, contains a large single copy region (LSC) of 88,720 bp and a small single copy region (SSC) of 19,338 bp, which were separated by a pair of inverted repeat (IR) regions of 25,981 bp. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 38 transfer RNA genes. The overall GC content of the whole genome is 36.7% and the corresponding values of the LSC, SSC, and IR regions are 34.6, 30.0, and 42.9%, respectively. Further phylogenomic analysis showed that clustered together with
是非洲一种重要的经济树种。在本研究中,从Illumina HiSeq双端测序数据中确定了该树种的完整叶绿体基因组(cpDNA)序列。该cpDNA长度为159,725 bp,包含一个88,720 bp的大单拷贝区域(LSC)和一个19,338 bp的小单拷贝区域(SSC),它们被一对25,981 bp的反向重复(IR)区域隔开。该基因组包含130个基因,包括85个蛋白质编码基因、8个核糖体RNA基因和38个转移RNA基因。全基因组的总体GC含量为36.7%,LSC、SSC和IR区域的相应值分别为34.6%、30.0%和42.9%。进一步的系统基因组分析表明,该树种与……聚集在一起