• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

.的完整叶绿体基因组序列

The complete chloroplast genome sequence of .

作者信息

Wang Yi, Yuan Xiaolong, Chen Zhonghua, Luo Ting

机构信息

Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming Yunnan, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2403-2404. doi: 10.1080/23802359.2019.1636727.

DOI:10.1080/23802359.2019.1636727
PMID:33365563
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687629/
Abstract

is an important economical tree in Africa. In this study, the complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data. The cpDNA is 159,725 bp in length, contains a large single copy region (LSC) of 88,720 bp and a small single copy region (SSC) of 19,338 bp, which were separated by a pair of inverted repeat (IR) regions of 25,981 bp. The genome contains 130 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 38 transfer RNA genes. The overall GC content of the whole genome is 36.7% and the corresponding values of the LSC, SSC, and IR regions are 34.6, 30.0, and 42.9%, respectively. Further phylogenomic analysis showed that clustered together with

摘要

是非洲一种重要的经济树种。在本研究中,从Illumina HiSeq双端测序数据中确定了该树种的完整叶绿体基因组(cpDNA)序列。该cpDNA长度为159,725 bp,包含一个88,720 bp的大单拷贝区域(LSC)和一个19,338 bp的小单拷贝区域(SSC),它们被一对25,981 bp的反向重复(IR)区域隔开。该基因组包含130个基因,包括85个蛋白质编码基因、8个核糖体RNA基因和38个转移RNA基因。全基因组的总体GC含量为36.7%,LSC、SSC和IR区域的相应值分别为34.6%、30.0%和42.9%。进一步的系统基因组分析表明,该树种与……聚集在一起

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a68/7687629/f5060d459e36/TMDN_A_1636727_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a68/7687629/f5060d459e36/TMDN_A_1636727_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a68/7687629/f5060d459e36/TMDN_A_1636727_F0001_B.jpg

相似文献

1
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2403-2404. doi: 10.1080/23802359.2019.1636727.
2
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 13;4(2):2519-2520. doi: 10.1080/23802359.2019.1640086.
3
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3465-3466. doi: 10.1080/23802359.2019.1674706.
4
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3469-3470. doi: 10.1080/23802359.2019.1674710.
5
The complete chloroplast genome sequence of .……的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Sep 12;4(2):2988-2989. doi: 10.1080/23802359.2019.1664947.
6
The complete chloroplast genome sequence of .……的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Nov 12;4(2):3977-3978. doi: 10.1080/23802359.2019.1688720.
7
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Nov 12;4(2):3950-3951. doi: 10.1080/23802359.2019.1688114.
8
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3471-3472. doi: 10.1080/23802359.2019.1674711.
9
The complete chloroplast genome sequence of ..的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2289-2290. doi: 10.1080/23802359.2019.1627929.
10
The complete chloroplast genome sequence of .……的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2019 Nov 12;4(2):3943-3944. doi: 10.1080/23802359.2019.1688108.

本文引用的文献

1
Identification of genes involved in shea butter biosynthesis from Vitellaria paradoxa fruits through transcriptomics and functional heterologous expression.通过转录组学和功能异源表达鉴定乳木果果实中参与乳木果油生物合成的基因。
Appl Microbiol Biotechnol. 2019 May;103(9):3727-3736. doi: 10.1007/s00253-019-09720-3. Epub 2019 Mar 26.
2
GeSeq - versatile and accurate annotation of organelle genomes.GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
3
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
4
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.RAxML-VI-HPC:基于最大似然法的系统发育分析,适用于数千个分类单元及混合模型。
Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23.
5
Phenolic constituents of shea (Vitellaria paradoxa) kernels.乳木果(乳油木)果仁中的酚类成分。
J Agric Food Chem. 2003 Oct 8;51(21):6268-73. doi: 10.1021/jf034687t.