.的完整叶绿体基因组序列
The complete chloroplast genome sequence of .
作者信息
Wang Yi, Hao Jiabo, Lu Bin
机构信息
Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry, Kunming, P.R. China.
出版信息
Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3471-3472. doi: 10.1080/23802359.2019.1674711.
The first complete chloroplast genome (cpDNA) sequence of was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 163,347 bp in length, contains a large single-copy (LSC) region of 87,838 bp and a small single-copy (SSC) region of 13,935 bp, which were separated by a pair of inverted repeats (IRs) regions of 30,787 bp. The genome contains 129 genes, including 84 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall guanine-cytosine (GC) content of the whole genome is 37.5%, and the corresponding values of the LSC, SSC, and IR regions are 35.8%, 32.6%, and 41.1%, respectively. Further, phylogenomic analysis showed that clustered together with .
在本研究中，通过Illumina HiSeq双末端测序数据确定了首个完整的叶绿体基因组（cpDNA）序列。该cpDNA长度为163,347 bp，包含一个87,838 bp的大单拷贝（LSC）区域和一个13,935 bp的小单拷贝（SSC）区域，它们被一对30,787 bp的反向重复（IR）区域隔开。该基因组包含129个基因，包括84个蛋白质编码基因、8个核糖体RNA基因和37个转运RNA基因。全基因组的鸟嘌呤-胞嘧啶（GC）总体含量为37.5%，LSC、SSC和IR区域的相应值分别为35.8%、32.6%和41.1%。此外，系统发育基因组分析表明，[物种名称1]与[物种名称2]聚集在一起。
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