姜科（Zingiberaceae）植物叶绿体全基因组的特征分析。
Characterization of the complete chloroplast genome of (Zingiberaceae).
作者信息
Li Zhong-Ji, Zhang Jie, Liu Ying-Ying, Liu Xiao-Li, Li Guo-Dong, Qian Zi-Gang
机构信息
Faculty of Traditional Chinese Pharmacy, Yunnan University of Chinese Medicine, Kunming, China.
Yunnan Insitute for Food and Drug, Kunming, China.
出版信息
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2431-2432. doi: 10.1080/23802359.2019.1637295.
T. L. Wu (Zingiberaceae) is a herbaceous perennial grown in Hainan Province, China, which is an important medicinal plant used for the improvement of gastrointestinal motility. The complete chloroplast genome of was assembled based on next-generation sequencing. The plastome was a quadripartite circular with 16,3608 bp in length, including two inverted repeat (IR, 22,696 bp) regions, one large single-copy region (LSC) and one small single-copy region (SSC) of 88,680 bp and 29,536 bp, respectively. The chloroplast genome contained 123 genes, including 85 protein-coding genes, 30 tRNA genes, and 8 rRNA genes. The overall GC content of the whole genome is 36.1%. Phylogenetic analysis strongly supported and its congeneric species, and , as sister group with 100% bootstrap value.
吴茱萸（芸香科）是一种多年生草本植物，生长在中国海南省，是一种用于改善胃肠动力的重要药用植物。基于二代测序技术组装了其完整的叶绿体基因组。该质体基因组是一个四分体环状结构，长度为163,608 bp，包括两个反向重复（IR，22,696 bp）区域、一个大单拷贝区域（LSC）和一个小单拷贝区域（SSC），分别为88,680 bp和29,536 bp。叶绿体基因组包含123个基因，包括85个蛋白质编码基因、30个tRNA基因和8个rRNA基因。全基因组的总体GC含量为36.1%。系统发育分析有力地支持了吴茱萸及其同属物种花椒和两面针作为姐妹群，自展值为100%。
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