.的完整叶绿体基因组

The complete chloroplast genome of .

作者信息

Ma Mengli, Lu Bingyue

机构信息

Key Laboratory for Research and Utilization of Characteristic Biological Resources in Southern Yunnan, College of Life Science and Technology, Honghe University, Mengzi, Yunnan, PR China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 24;5(1):848-849. doi: 10.1080/23802359.2020.1717382.

DOI:10.1080/23802359.2020.1717382

PMID:33366779

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748665/

Abstract

(Zingiberaceae) is an important edible and medicinal crop. The complete chloroplast (cp) genome of was determined using Illumina sequencing platform. The size of whole cp genome was 163,648 bp, containing a small single copy (SSC) region of 15,355 bp and a large single copy (LSC) region of 88,741 bp, which were separated by a pair of inverted repeat (IRs) regions (29,776 bp). The cp genome contained 133 genes, including eight ribosomal RNA genes (4 rRNA species), 38 transfer RNA genes (30 tRNA species) and 87 protein-coding genes (79 PCG species). The overall GC content of cp genome is 36.02%. To investigate the evolution status of , as well as Zingiberales, a phylogenetic tree with and other 16 species was constructed based on their complete chloroplast genomes. Phylogenetic analysis revealed that was closely related to .

摘要

（姜科）是一种重要的食用和药用作物。利用Illumina测序平台测定了[植物名称]的完整叶绿体（cp）基因组。整个cp基因组大小为163,648 bp，包含一个15,355 bp的小单拷贝（SSC）区域和一个88,741 bp的大单拷贝（LSC）区域，它们被一对反向重复（IR）区域（29,776 bp）隔开。[植物名称]的cp基因组包含133个基因，包括8个核糖体RNA基因（4种rRNA）、38个转运RNA基因（30种tRNA）和87个蛋白质编码基因（79种PCG）。[植物名称]cp基因组的总体GC含量为36.02%。为了研究[植物名称]以及姜目植物的进化地位，基于其完整叶绿体基因组构建了包含[植物名称]和其他16个物种的系统发育树。系统发育分析表明[植物名称]与[另一植物名称]密切相关。