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(鲤齿科)的完整线粒体基因组及鲤齿目系统发育研究

The complete mitochondrial genome of ( Cyprinodontidae) and phylogenetic studies of cyprinodontiformes.

作者信息

Huang Youkun, Liu Bingjian, Meng Fang, Wang Qi, Zhu Kehua, Zhang Jianshe, Jing Fei, Xia Liping, Liu Yifan

机构信息

National Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, China.

National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 30;4(2):3820-3821. doi: 10.1080/23802359.2019.1681308.

Abstract

We report the complete mitochondrial genome sequence of . The genome is found to be 16636 bp in length and has a base composition of A (29.59%), G (14.61%), C (28.26%), and T (27.54%). Similar to other species, it contains a typically conserved structure including 13 protein-coding genes, 2 rRNA genes, 1 control region (D-loop), and 22tRNA genes. The proportion of coding sequences with a total length of 11,533 bp is 69.33%, which encodes 3837 amino acids. All protein-coding genes started with Met, ND1, CO1, ATP8, ATP6, CO3, ND4L, ND5, ND6 and CytB ended by TAA as a stop codon, ND2 and ND3 ended by TAG as a stop codon, CO3 and ND4 ended by a single T. The lengths of 12S ribosomal RNA is 948 bp, ranging from 70 bp to 1018 bp, and the lengths of 16S ribosomal RNA is 1674 bp, ranging from 1090 bp to 2764 bp. The length of control region is 879 bp, ranging from 15757 bp to 16636 bp, respectively. The complete mitochondrial genome sequence provided here would be useful for further understanding the evolution of ratite and conservation genetics of

摘要

我们报告了……的完整线粒体基因组序列。该基因组长度为16636 bp,碱基组成为A(29.59%)、G(14.61%)、C(28.26%)和T(27.54%)。与其他……物种相似,它包含一个典型的保守结构,包括13个蛋白质编码基因、2个rRNA基因、1个控制区(D环)和22个tRNA基因。编码序列总长度为11533 bp,比例为69.33%,编码3837个氨基酸。所有蛋白质编码基因均以Met起始,ND1、CO1、ATP8、ATP6、CO3、ND4L、ND5、ND6和CytB以TAA作为终止密码子结束,ND2和ND3以TAG作为终止密码子结束,CO3和ND4以单个T结束。12S核糖体RNA长度为948 bp,范围从70 bp到1018 bp,16S核糖体RNA长度为1674 bp,范围从1090 bp到2764 bp。控制区长度为879 bp,分别位于15757 bp到16636 bp之间。此处提供的完整线粒体基因组序列将有助于进一步了解平胸鸟类的进化以及……的保护遗传学

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8520/7707524/b5769b9d415d/TMDN_A_1681308_F0001_B.jpg

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