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在恶臭假单胞菌KT2440中通过将木质素衍生物与甘油共同进料提高聚羟基脂肪酸酯的产量。

Enhancement of polyhydroxyalkanoate production by co-feeding lignin derivatives with glycerol in Pseudomonas putida KT2440.

作者信息

Xu Zhangyang, Pan Chunmei, Li Xiaolu, Hao Naijia, Zhang Tong, Gaffrey Matthew J, Pu Yunqiao, Cort John R, Ragauskas Arthur J, Qian Wei-Jun, Yang Bin

机构信息

Bioproducts, Sciences & Engineering Laboratory, Department of Biological Systems Engineering, Washington State University, Richland, WA, 99354, USA.

College of Food and Bioengineering, Henan University of Animal Husbandry and Economy, Zhengzhou, 450046, Henan, China.

出版信息

Biotechnol Biofuels. 2021 Jan 7;14(1):11. doi: 10.1186/s13068-020-01861-2.

Abstract

BACKGROUND

Efficient utilization of all available carbons from lignocellulosic biomass is critical for economic efficiency of a bioconversion process to produce renewable bioproducts. However, the metabolic responses that enable Pseudomonas putida to utilize mixed carbon sources to generate reducing power and polyhydroxyalkanoate (PHA) remain unclear. Previous research has mainly focused on different fermentation strategies, including the sequential feeding of xylose as the growth stage substrate and octanoic acid as the PHA-producing substrate, feeding glycerol as the sole carbon substrate, and co-feeding of lignin and glucose. This study developed a new strategy-co-feeding glycerol and lignin derivatives such as benzoate, vanillin, and vanillic acid in Pseudomonas putida KT2440-for the first time, which simultaneously improved both cell biomass and PHA production.

RESULTS

Co-feeding lignin derivatives (i.e. benzoate, vanillin, and vanillic acid) and glycerol to P. putida KT2440 was shown for the first time to simultaneously increase cell dry weight (CDW) by 9.4-16.1% and PHA content by 29.0-63.2%, respectively, compared with feeding glycerol alone. GC-MS results revealed that the addition of lignin derivatives to glycerol decreased the distribution of long-chain monomers (C10 and C12) by 0.4-4.4% and increased the distribution of short-chain monomers (C6 and C8) by 0.8-3.5%. The H-C HMBC, H-C HSQC, and H-H COSY NMR analysis confirmed that the PHA monomers (C6-C14) were produced when glycerol was fed to the bacteria alone or together with lignin derivatives. Moreover, investigation of the glycerol/benzoate/nitrogen ratios showed that benzoate acted as an independent factor in PHA synthesis. Furthermore, H, C and P NMR metabolite analysis and mass spectrometry-based quantitative proteomics measurements suggested that the addition of benzoate stimulated oxidative-stress responses, enhanced glycerol consumption, and altered the intracellular NAD/NADH and NADPH/NADP ratios by up-regulating the proteins involved in energy generation and storage processes, including the Entner-Doudoroff (ED) pathway, the reductive TCA route, trehalose degradation, fatty acid β-oxidation, and PHA biosynthesis.

CONCLUSIONS

This work demonstrated an effective co-carbon feeding strategy to improve PHA content/yield and convert lignin derivatives into value-added products in P. putida KT2440. Co-feeding lignin break-down products with other carbon sources, such as glycerol, has been demonstrated as an efficient way to utilize biomass to increase PHA production in P. putida KT2440. Moreover, the involvement of aromatic degradation favours further lignin utilization, and the combination of proteomics and metabolomics with NMR sheds light on the metabolic and regulatory mechanisms for cellular redox balance and potential genetic targets for a higher biomass carbon conversion efficiency.

摘要

背景

有效利用木质纤维素生物质中的所有可用碳对于生物转化过程生产可再生生物产品的经济效率至关重要。然而,使恶臭假单胞菌能够利用混合碳源产生还原力和聚羟基脂肪酸酯(PHA)的代谢反应仍不清楚。先前的研究主要集中在不同的发酵策略上,包括依次以木糖作为生长阶段底物和辛酸作为PHA生产底物进行补料、以甘油作为唯一碳底物进行补料以及木质素和葡萄糖的共补料。本研究首次开发了一种新策略——在恶臭假单胞菌KT2440中共补料甘油和木质素衍生物(如苯甲酸盐、香草醛和香草酸),这同时提高了细胞生物量和PHA产量。

结果

首次证明,与单独补料甘油相比,向恶臭假单胞菌KT2440中共补料木质素衍生物(即苯甲酸盐、香草醛和香草酸)和甘油可使细胞干重(CDW)分别增加9.4 - 16.1%,PHA含量分别增加29.0 - 63.2%。气相色谱 - 质谱(GC - MS)结果表明,向甘油中添加木质素衍生物使长链单体(C10和C12)的分布降低了0.4 - 4.4%,短链单体(C6和C8)的分布增加了0.8 - 3.5%。异核多键相关(H - C HMBC)、异核单量子相干(H - C HSQC)和同核化学位移相关谱(H - H COSY)核磁共振分析证实,当单独向细菌补料甘油或与木质素衍生物一起补料时,会产生PHA单体(C6 - C14)。此外,对甘油/苯甲酸盐/氮比例的研究表明,苯甲酸盐在PHA合成中起独立因素的作用。此外,氢、碳和磷核磁共振代谢物分析以及基于质谱的定量蛋白质组学测量表明,苯甲酸盐的添加刺激了氧化应激反应,增强了甘油消耗,并通过上调参与能量产生和储存过程的蛋白质(包括恩特纳 - 杜德洛夫(ED)途径、还原性三羧酸循环途径、海藻糖降解、脂肪酸β - 氧化和PHA生物合成)改变了细胞内烟酰胺腺嘌呤二核苷酸/还原型烟酰胺腺嘌呤二核苷酸(NAD/NADH)和烟酰胺腺嘌呤二核苷酸磷酸/还原型烟酰胺腺嘌呤二核苷酸磷酸(NADPH/NADP)的比例。

结论

本研究证明了一种有效的共碳补料策略,可提高恶臭假单胞菌KT2440中PHA的含量/产量,并将木质素衍生物转化为增值产品。已证明将木质素分解产物与其他碳源(如甘油)共补料是利用生物质提高恶臭假单胞菌KT2440中PHA产量的有效方法。此外,芳香族降解的参与有利于进一步利用木质素,蛋白质组学和代谢组学与核磁共振的结合揭示了细胞氧化还原平衡的代谢和调控机制以及提高生物质碳转化效率的潜在遗传靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/41b1/7792162/3d0b128a79a5/13068_2020_1861_Fig1_HTML.jpg

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