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2
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3
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Breaking the vicious circle: Extrachromosomal circular DNA as an emerging player in tumour evolution.打破恶性循环:染色体外环状DNA在肿瘤进化中崭露头角
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Progress on the role of extrachromosomal DNA in tumor pathogenesis and evolution.染色体外 DNA 在肿瘤发病机制和进化中的作用研究进展。
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Classification of extrachromosomal circular DNA with a focus on the role of extrachromosomal DNA (ecDNA) in tumor heterogeneity and progression.以染色体外环状 DNA 分类为重点,探讨染色体外 DNA(ecDNA)在肿瘤异质性和进展中的作用。
Biochim Biophys Acta Rev Cancer. 2020 Aug;1874(1):188392. doi: 10.1016/j.bbcan.2020.188392. Epub 2020 Jul 28.
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Extrachromosomal DNA (ecDNA) in cancer pathogenesis.癌症发病机制中的染色体外 DNA(ecDNA)。
Curr Opin Genet Dev. 2021 Feb;66:78-82. doi: 10.1016/j.gde.2021.01.001. Epub 2021 Jan 18.

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Dynamics of Amino Acid Metabolism, Gene Expression, and Circulomics in a Recombinant Chinese Hamster Ovary Cell Line Adapted to Moderate and High Levels of Extracellular Lactate.适应中高细胞外乳酸水平的重组中国仓鼠卵巢细胞系中氨基酸代谢、基因表达和循环组学的动态变化。
Genes (Basel). 2023 Aug 2;14(8):1576. doi: 10.3390/genes14081576.
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Microevolutionary dynamics of eccDNA in Chinese hamster ovary cells grown in fed-batch cultures under control and lactate-stressed conditions.在对照和乳酸应激条件下的分批培养中,中国仓鼠卵巢细胞中 eccDNA 的微观进化动力学。
Sci Rep. 2023 Jan 21;13(1):1200. doi: 10.1038/s41598-023-27962-0.
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3D chromatin architecture and transcription regulation in cancer.癌症中的 3D 染色质结构和转录调控。
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Front Vet Sci. 2021 Sep 9;8:693641. doi: 10.3389/fvets.2021.693641. eCollection 2021.
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Palindromes in DNA-A Risk for Genome Stability and Implications in Cancer.DNA中的回文序列——基因组稳定性的风险及对癌症的影响
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本文引用的文献

1
Current understanding of extrachromosomal circular DNA in cancer pathogenesis and therapeutic resistance.当前对癌症发病机制和治疗耐药性中外源环状 DNA 的认识。
J Hematol Oncol. 2020 Sep 14;13(1):124. doi: 10.1186/s13045-020-00960-9.
2
AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications.AmpliconReconstructor 通过整合 NGS 和光学作图技术来解析复杂的局灶扩增结构。
Nat Commun. 2020 Sep 1;11(1):4374. doi: 10.1038/s41467-020-18099-z.
3
Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers.染色体外 DNA 与多种癌症中的癌基因扩增和不良预后相关。
Nat Genet. 2020 Sep;52(9):891-897. doi: 10.1038/s41588-020-0678-2. Epub 2020 Aug 17.
4
Classification of extrachromosomal circular DNA with a focus on the role of extrachromosomal DNA (ecDNA) in tumor heterogeneity and progression.以染色体外环状 DNA 分类为重点,探讨染色体外 DNA(ecDNA)在肿瘤异质性和进展中的作用。
Biochim Biophys Acta Rev Cancer. 2020 Aug;1874(1):188392. doi: 10.1016/j.bbcan.2020.188392. Epub 2020 Jul 28.
5
Extrachromosomal DNA-relieving heredity constraints, accelerating tumour evolution.染色体外 DNA 缓解遗传限制,加速肿瘤进化。
Ann Oncol. 2020 Jul;31(7):884-893. doi: 10.1016/j.annonc.2020.03.303. Epub 2020 Apr 7.
6
Circles with a Point: New Insights into Oncogenic Extrachromosomal DNA.带点的圆:致癌性染色体外 DNA 的新见解。
Cancer Cell. 2020 Feb 10;37(2):145-146. doi: 10.1016/j.ccell.2020.01.008.
7
Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma.染色体外环状 DNA 驱动神经母细胞瘤致癌基因组重塑。
Nat Genet. 2020 Jan;52(1):29-34. doi: 10.1038/s41588-019-0547-z. Epub 2019 Dec 16.
8
Transcription-induced formation of extrachromosomal DNA during yeast ageing.酵母衰老过程中转录诱导的染色体外 DNA 的形成。
PLoS Biol. 2019 Dec 3;17(12):e3000471. doi: 10.1371/journal.pbio.3000471. eCollection 2019 Dec.
9
Functional Enhancers Shape Extrachromosomal Oncogene Amplifications.功能增强子塑造染色体外致癌基因扩增。
Cell. 2019 Nov 27;179(6):1330-1341.e13. doi: 10.1016/j.cell.2019.10.039. Epub 2019 Nov 21.
10
Circular ecDNA promotes accessible chromatin and high oncogene expression.环状 ecDNA 促进染色质可及性和高致癌基因表达。
Nature. 2019 Nov;575(7784):699-703. doi: 10.1038/s41586-019-1763-5. Epub 2019 Nov 20.

染色体外DNA在肿瘤发生和癌症治疗耐药性中的新见解

New insights of extrachromosomal DNA in tumorigenesis and therapeutic resistance of cancer.

作者信息

Qiu Hui, Shao Zhi-Ying, Wen Xin, Zhang Long-Zhen

机构信息

Cancer Institute, Xuzhou Medical University Xuzhou 221000, Jiangsu, China.

Department of Radiation Oncology, Affiliated Hospital of Xuzhou Medical University Xuzhou 221000, Jiangsu, China.

出版信息

Am J Cancer Res. 2020 Dec 1;10(12):4056-4065. eCollection 2020.

PMID:33414985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7783743/
Abstract

In the past few decades, the studies of extrachromosomal DNA (ecDNA), which existed independently of chromosomes, were tepid. However, recent studies on ecDNA rekindled the enthusiasm of oncologists for further studying ecDNA. In this review, we summarized the recent advances of ecDNA in oncogenesis and oncotherapy. ecDNA consists of highly open chromatin, and its circular structure enables ultra-long-range chromatin contacts. ecDNA is not inherited in accordance with Mendel's laws. Furthermore, ecDNA is widely existed in cancer cells, but almost never found in normal cells. It has been found that ecDNA played important roles in tumorigenesis and tumor progression, including oncogene amplification, tumor heterogeneity, enhancer hijacking and genomic rearrangement. More importantly, ecDNA is closely related to cancer treatment resistance. In hence, further understanding of ecDNA would contribute to developing innovative targeting ecDNA therapies.

摘要

在过去几十年里,对独立于染色体存在的染色体外DNA(ecDNA)的研究一直不温不火。然而,最近关于ecDNA的研究重新点燃了肿瘤学家进一步研究ecDNA的热情。在这篇综述中,我们总结了ecDNA在肿瘤发生和肿瘤治疗方面的最新进展。ecDNA由高度开放的染色质组成,其环状结构能够实现超远距离的染色质接触。ecDNA不按照孟德尔定律遗传。此外,ecDNA广泛存在于癌细胞中,但在正常细胞中几乎从未发现。已经发现ecDNA在肿瘤发生和肿瘤进展中发挥重要作用,包括癌基因扩增、肿瘤异质性、增强子劫持和基因组重排。更重要的是,ecDNA与癌症治疗耐药性密切相关。因此,进一步了解ecDNA将有助于开发创新的靶向ecDNA疗法。