Maeng Soohyun, Park Yuna, Han Ju Hyun, Lee Sang Eun, Kim Myung Kyum, Subramani Gayathri
Department of Bio & Environmental Technology, College of Natural Science, Seoul Women's University, Seoul, 139-774, Republic of Korea.
Antonie Van Leeuwenhoek. 2021 Feb;114(2):161-168. doi: 10.1007/s10482-020-01509-z. Epub 2021 Jan 15.
A Gram-stain negative, aerobic, rod-shaped, yellow-coloured bacterium, designated strain 17J28-1, was isolated from soil of Jeju Island, Korea. Optimal growth was found to occur at 30 °C, at pH 6.0 and in the absence of NaCl on R2A at 30 °C. Strain 17J28-1 showed resistance to UV-radiation. The draft genome sequence of strain 17J28-1 is 4804,510 bp long with a 49.4% G + C content. Phylogenetic analyses based on 16S rRNA gene sequences showed that strain 17J28-1 forms a distinct lineage within the family Chitinophagaceae (order Chitinophagales, class Chitinophagia) and is closely related to Cnuella takakiae (93.7% 16S rRNA gene sequence similarity) and Flavisolibacter ginsengiterrae (93.1%). In addition, genomic comparison using digital DNA-DNA hybridization (dDDH) and OrthoANI analyses between the novel organism and the members of the family Chitinophagaceae revealed identities of 65.5-74.1% and 18.1-28%, respectively. The predominant cellular fatty acids were identified as C iso, C iso G and C iso 3-OH and the major respiratory quinone as MK-7. Based on these data we propose that strain 17J28-1 (= KCTC 62223 = JCM 33202) represents a novel genus and species in the family Chitinophagaceae, for which the name Pseudocnuella soli gen. nov. sp. nov. is proposed.
从韩国济州岛土壤中分离出一株革兰氏染色阴性、需氧、杆状、黄色的细菌,命名为菌株17J28 - 1。发现其在30℃、pH 6.0且无氯化钠的条件下于R2A培养基上30℃培养时生长最佳。菌株17J28 - 1对紫外线辐射具有抗性。菌株17J28 - 1的基因组草图序列长4804510 bp,G + C含量为49.4%。基于16S rRNA基因序列的系统发育分析表明,菌株17J28 - 1在噬几丁质菌科(噬几丁质菌目,噬几丁质菌纲)内形成一个独特的谱系,与高木氏栖泥杆菌(16S rRNA基因序列相似度为93.7%)和人参黄杆菌(93.1%)密切相关。此外,通过数字DNA - DNA杂交(dDDH)和OrthoANI分析对该新菌株与噬几丁质菌科成员进行基因组比较,结果显示其相似度分别为65.5 - 74.1%和18.1 - 28%。主要的细胞脂肪酸被鉴定为异C、异C G和异C 3 - OH,主要呼吸醌为MK - 7。基于这些数据,我们提议菌株17J28 - 1(= KCTC 62223 = JCM 33202)代表噬几丁质菌科中的一个新属和新种,为此提出新名称土壤假栖泥杆菌属新属新种。