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附睾球蛋白基因表达模式和 FOXJ1 依赖性调控表明其与纤毛发生的功能关联。

Androglobin gene expression patterns and FOXJ1-dependent regulation indicate its functional association with ciliogenesis.

机构信息

Section of Medicine, Department of Endocrinology, Metabolism and Cardiovascular System, University of Fribourg, Fribourg, Switzerland.

Faculty of Biology, Institute of Organismic and Molecular Evolution, Molecular Genetics & Genome Analysis, Johannes Gutenberg University Mainz, Mainz, Germany.

出版信息

J Biol Chem. 2021 Jan-Jun;296:100291. doi: 10.1016/j.jbc.2021.100291. Epub 2021 Jan 13.

DOI:10.1016/j.jbc.2021.100291
PMID:33453283
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7949040/
Abstract

Androglobin (ADGB) represents the latest addition to the globin superfamily in metazoans. The chimeric protein comprises a calpain domain and a unique circularly permutated globin domain. ADGB expression levels are most abundant in mammalian testis, but its cell-type-specific expression, regulation, and function have remained unexplored. Analyzing bulk and single-cell mRNA-Seq data from mammalian tissues, we found that-in addition to the testes-ADGB is prominently expressed in the female reproductive tract, lungs, and brain, specifically being associated with cell types forming motile cilia. Correlation analysis suggested coregulation of ADGB with FOXJ1, a crucial transcription factor of ciliogenesis. Investigating the transcriptional regulation of the ADGB gene, we characterized its promoter using epigenomic datasets, exogenous promoter-dependent luciferase assays, and CRISPR/dCas9-VPR-mediated activation approaches. Reporter gene assays revealed that FOXJ1 indeed substantially enhanced luciferase activity driven by the ADGB promoter. ChIP assays confirmed binding of FOXJ1 to the endogenous ADGB promoter region. We dissected the minimal sequence required for FOXJ1-dependent regulation and fine mapped the FOXJ1 binding site to two evolutionarily conserved regions within the ADGB promoter. FOXJ1 overexpression significantly increased endogenous ADGB mRNA levels in HEK293 and MCF-7 cells. Similar results were observed upon RFX2 overexpression, another key transcription factor in ciliogenesis. The complex transcriptional regulation of the ADGB locus was illustrated by identifying a distal enhancer, responsible for synergistic regulation by RFX2 and FOXJ1. Finally, cell culture studies indicated an ADGB-dependent increase in the number of ciliated cells upon overexpression of the full-length protein, confirming a ciliogenesis-associated role of ADGB in mammals.

摘要

安德罗球蛋白 (ADGB) 是后生动物球蛋白超家族的最新成员。该嵌合蛋白包含一个钙蛋白酶结构域和一个独特的环状重排球蛋白结构域。ADGB 的表达水平在哺乳动物睾丸中最为丰富,但它的细胞类型特异性表达、调控和功能仍未被探索。通过分析哺乳动物组织的批量和单细胞 mRNA-Seq 数据,我们发现除了睾丸外,ADGB 在女性生殖道、肺部和大脑中也大量表达,特别是与形成游动纤毛的细胞类型有关。相关性分析表明 ADGB 与 FOXJ1 共同调控,FOXJ1 是纤毛发生的关键转录因子。研究 ADGB 基因的转录调控,我们使用表观基因组数据集、外源性启动子依赖性荧光素酶测定和 CRISPR/dCas9-VPR 介导的激活方法来表征其启动子。报告基因测定显示,FOXJ1 确实大大增强了由 ADGB 启动子驱动的荧光素酶活性。ChIP 测定证实了 FOXJ1 与内源性 ADGB 启动子区域的结合。我们剖析了 FOXJ1 依赖性调节所需的最小序列,并将 FOXJ1 结合位点精细映射到 ADGB 启动子内两个进化上保守的区域。FOXJ1 过表达显著增加了 HEK293 和 MCF-7 细胞中内源性 ADGB mRNA 水平。在纤毛发生的另一个关键转录因子 RFX2 过表达时也观察到类似的结果。通过鉴定负责 RFX2 和 FOXJ1 协同调节的远端增强子,说明了 ADGB 基因座的复杂转录调控。最后,细胞培养研究表明,全长蛋白过表达时,ADGB 依赖性增加了纤毛细胞的数量,证实了 ADGB 在哺乳动物中与纤毛发生相关的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/2d04af38076a/gr10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/0191baccea94/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/36774e674e0d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/0e2cfa4730eb/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/fd87a9d5ca33/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/8fa9fda873e1/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/2dd1124a77a2/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/06ae9723fe50/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/83de4b777450/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/9a9f891782c9/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/2d04af38076a/gr10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/0191baccea94/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/36774e674e0d/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/0e2cfa4730eb/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/fd87a9d5ca33/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/8fa9fda873e1/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/2dd1124a77a2/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/06ae9723fe50/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/83de4b777450/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/9a9f891782c9/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ed4b/7949040/2d04af38076a/gr10.jpg

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