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(芸香科,柑橘属)叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of (Rutaceae, Citrus).

作者信息

Wu Ruikai, Cao Tianyi, Ren Jia-Ju, Liu Bao-Jue

机构信息

Department of Orthopaedics, Zhejiang hospital, Hangzhou, Zhejiang, China.

Zhejiang Chinese Medical University, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jun 4;5(3):2284-2285. doi: 10.1080/23802359.2020.1772147.

Abstract

The peel of can be useful as a kind of traditional Chinese medicine in China. The circular complete chloroplast genome of was 160,101 bp in length with the typical quadripartite structure of angiosperms, including 87,721 bp large single-copy region (LSC), 18,394 bp small single-copy region (SSC) of and a pair of 26,993 bp inverted repeat (IR) regions. The overall nucleotide composition of chloroplast genome sequence is 30.5% A, 31.0% T, C (19.6%), G (18.9%), and the total G + C content of 38.5%. A total of 138 genes were annotated in chloroplast genome of The phylogenetic tree result showed that was evolutionarily close to in the family Rutaceae the genus Citrus by the maximum-likelihood (ML) method.

摘要

在中国,[植物名称]的果皮可用作一种传统中药。[植物名称]的环状完整叶绿体基因组长度为160,101 bp,具有被子植物典型的四分体结构,包括87,721 bp的大单拷贝区域(LSC)、18,394 bp的小单拷贝区域(SSC)和一对26,993 bp的反向重复(IR)区域。叶绿体基因组序列的总体核苷酸组成为30.5%的A、31.0%的T、19.6%的C、18.9%的G,总G + C含量为38.5%。[植物名称]的叶绿体基因组中共注释了138个基因。系统发育树结果表明,通过最大似然(ML)法,[植物名称]在芸香科柑橘属中与[另一植物名称]在进化上关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99d7/7782356/ed43ebe1e935/TMDN_A_1772147_F0001_C.jpg

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