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(竹亚科)的完整叶绿体基因组,(竹亚科)是中国石灰岩山地特有的优势竹种。

The complete chloroplast genome of (Bambusoideae), a dominant bamboo species in limestone mountains endemic to China.

作者信息

Cao Binbin, Ge Tingting, Ding Shixiong, Guo Chunce

机构信息

Jiangxi Provincial Key Laboratory for Bamboo Germplasm Resources and Utilization, Forestry College, Jiangxi Agricultural University, Nanchang, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 25;5(3):3193-3194. doi: 10.1080/23802359.2020.1810152.

Abstract

is a dominant species in limestone mountains endemic to China. Here, we characterized its complete chloroplast genome. It is a circular DNA molecule of 139,689 bp in length, including a pair of 21,798 bp inverted repeats (IRs), a 12,872 bp small single-copy (SSC) region and an 83221 bp large single-copy (LSC) region. The total GC content of chloroplast genome was 38.9%, and it encodes a total of 137 functional genes, including 89 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. The phylogenetic analysis shows that is highly clustered in the clade (V), sister to the lineage of var. + .

摘要

是中国石灰岩山地特有的优势物种。在此,我们对其完整的叶绿体基因组进行了特征分析。它是一个长度为139,689 bp的环状DNA分子,包括一对21,798 bp的反向重复序列(IRs)、一个12,872 bp的小单拷贝(SSC)区域和一个83,221 bp的大单拷贝(LSC)区域。叶绿体基因组的总GC含量为38.9%,共编码137个功能基因,包括89个蛋白质编码基因、40个tRNA基因和8个rRNA基因。系统发育分析表明,在分支(V)中高度聚类,是变种+谱系的姐妹。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c749/7783095/25f60aaec902/TMDN_A_1810152_F0001_C.jpg

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