• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

来自孟加拉国哈尔达河的(汉密尔顿,1822年)的完整线粒体基因组序列。

Complete mitochondrial genome sequence of (Hamilton, 1822) from the Halda river of Bangladesh.

作者信息

Kibria M M, Islam N, Billah M, Shawrob K S M, Rumi M H, Siddiki Amam Zonaed

机构信息

Department of Zoology, University of Chittagong, Chittagong, Bangladesh.

Halda River Research Laboratory, University of Chittagong, Chittagong,Bangladesh.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 30;5(3):3215-3217. doi: 10.1080/23802359.2020.1809542.

DOI:10.1080/23802359.2020.1809542
PMID:33458116
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782268/
Abstract

Catla () is one of the fastest-growing major carp found in South Asia as well as Bangladesh. is the second most popular indigenous carp species in the freshwater aquaculture industry of Bangladesh due to its relatively good taste and high market price. In this study, we disclosed the complete mitochondrial genome sequence of Bangladeshi Catla fish from Halda river located in Chittagong. The circular mitogenome of is 16,597 bp in length and nucleotide composition is AT-based (72%), contains 37 genes including 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and a D-loop (control region).

摘要

卡特拉鱼(Catla)是在南亚以及孟加拉国发现的生长速度最快的主要鲤鱼品种之一。由于其相对较好的口感和较高的市场价格,它是孟加拉国淡水养殖业中第二受欢迎的本土鲤鱼品种。在本研究中,我们公布了来自吉大港市哈尔达河的孟加拉国卡特拉鱼的完整线粒体基因组序列。卡特拉鱼的环状线粒体基因组长度为16,597 bp,核苷酸组成以AT为主(72%),包含37个基因,包括13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和一个D环(控制区)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/195d/7782268/f0f4d87ecf1f/TMDN_A_1809542_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/195d/7782268/f0f4d87ecf1f/TMDN_A_1809542_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/195d/7782268/f0f4d87ecf1f/TMDN_A_1809542_F0001_C.jpg

相似文献

1
Complete mitochondrial genome sequence of (Hamilton, 1822) from the Halda river of Bangladesh.来自孟加拉国哈尔达河的(汉密尔顿,1822年)的完整线粒体基因组序列。
Mitochondrial DNA B Resour. 2020 Aug 30;5(3):3215-3217. doi: 10.1080/23802359.2020.1809542.
2
Genetic variation of wild and hatchery populations of the catla Indian major carp (Catla catla Hamilton 1822: Cypriniformes, Cyprinidae) revealed by RAPD markers.RAPD 标记揭示的野生和养殖种群的印度鲤鱼(Catla catla Hamilton 1822:鲤形目,鲤科)的遗传变异。
Genet Mol Biol. 2009 Jan;32(1):197-201. doi: 10.1590/S1415-47572009005000013. Epub 2009 Jan 16.
3
Rapid recovery of complete mitogenome of Indian major carp, from low depth paired end Illumina sequencing.通过低深度双端Illumina测序快速恢复印度主要鲤鱼的完整线粒体基因组
Mitochondrial DNA B Resour. 2017 Mar 10;2(1):155-156. doi: 10.1080/23802359.2017.1298413.
4
Sibship assignment to the founders of a Bangladeshi Catla catla breeding population.将孟加拉国有须鲫养殖群体的创始个体分配给同一家系。
Genet Sel Evol. 2019 Apr 29;51(1):17. doi: 10.1186/s12711-019-0454-x.
5
The complete mitochondrial genome of (Hamilton, 1822) using long read sequencing.使用长读长测序技术获得的(汉密尔顿,1822年)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2021 Feb 9;6(2):402-403. doi: 10.1080/23802359.2020.1870879.
6
The draft genome of Labeo catla.印度鲶鱼的基因组草图。
BMC Res Notes. 2020 Sep 3;13(1):411. doi: 10.1186/s13104-020-05240-w.
7
Genetic diversity and genome-scale population structure of wild Indian major carp, (Hamilton, 1822), revealed by genotyping-by-sequencing.通过简化基因组测序揭示野生印度鲤鱼(Hamilton, 1822)的遗传多样性和全基因组水平的种群结构
Front Genet. 2023 May 9;14:1166385. doi: 10.3389/fgene.2023.1166385. eCollection 2023.
8
Transcriptome analysis revealed hub genes for muscle growth in Indian major carp, Catla catla (Hamilton, 1822).转录组分析揭示了印度鲤鱼(Catla catla)肌肉生长的关键基因。
Genomics. 2022 Jul;114(4):110393. doi: 10.1016/j.ygeno.2022.110393. Epub 2022 May 25.
9
Genetic variation in wild and hatchery population of Catla catla (Hamilton, 1822) analyzed through mtDNA cytochrome b region.通过线粒体DNA细胞色素b区域分析卡特拉鲇(汉密尔顿,1822年)野生和养殖种群的遗传变异。
Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Jan;29(1):126-131. doi: 10.1080/24701394.2016.1253072. Epub 2017 Jan 10.
10
Next-generation sequencing reveals significant variations in bacterial compositions across the gastrointestinal tracts of the Indian major carps, rohu (Labeo rohita), catla (Catla catla) and mrigal (Cirrhinus cirrhosis).下一代测序揭示了印度主要鲤鱼(罗非鱼、Catla catla 和 Cirrhinus cirrhosus)的胃肠道中细菌组成存在显著差异。
Lett Appl Microbiol. 2020 Mar;70(3):173-180. doi: 10.1111/lam.13256. Epub 2019 Dec 28.

引用本文的文献

1
Genetic improvement and genomic resources of important cyprinid species: status and future perspectives for sustainable production.重要鲤科鱼类的遗传改良与基因组资源:可持续生产的现状与未来展望
Front Genet. 2024 Sep 19;15:1398084. doi: 10.3389/fgene.2024.1398084. eCollection 2024.
2
Ecological Insights, and Fin Fish Diversity in Carps Spawning Grounds: Case Studies from the Surma River and Tanguar Haor, Bangladesh.生态见解以及鲤鱼产卵场的鱼类多样性:来自孟加拉国苏尔马河和坦瓜尔豪尔的案例研究
Scientifica (Cairo). 2024 Mar 25;2024:7195596. doi: 10.1155/2024/7195596. eCollection 2024.

本文引用的文献

1
The complete mitochondrial genome of Jinbian carp (Cypriniformes: Cyprinidae).金线鲤的完整线粒体基因组(鲤形目:鲤科)
Mitochondrial DNA B Resour. 2018 Oct 25;3(2):1096-1097. doi: 10.1080/23802359.2018.1495126.
2
Mitochondrial genome of Ying hybrid carp (Russian scattered scale mirror carp ♀ × carp-goldfish nucleocytoplasmic hybrid ♂).颖鲤(俄罗斯散鳞镜鲤♀×鲤鲫移核鱼♂)线粒体基因组
Mitochondrial DNA B Resour. 2016 Dec 9;1(1):925-926. doi: 10.1080/23802359.2016.1247661.
3
OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes.
细胞器基因组绘图 (OGDRAW) 版本 1.3.1:用于细胞器基因组图形可视化的扩展工具包。
Nucleic Acids Res. 2019 Jul 2;47(W1):W59-W64. doi: 10.1093/nar/gkz238.
4
GeSeq - versatile and accurate annotation of organelle genomes.GeSeq - 细胞器基因组的多功能和准确注释。
Nucleic Acids Res. 2017 Jul 3;45(W1):W6-W11. doi: 10.1093/nar/gkx391.
5
NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
6
MITOS: improved de novo metazoan mitochondrial genome annotation.MITOS:改进的从头后生动物线粒体基因组注释。
Mol Phylogenet Evol. 2013 Nov;69(2):313-9. doi: 10.1016/j.ympev.2012.08.023. Epub 2012 Sep 7.
7
The complete mitochondrial genome of the Oujiang color carp, Cyprinus carpio var. color (Cypriniformes, Cyprinidae).瓯江彩鲤(Cyprinus carpio var. color)(鲤形目,鲤科)的线粒体全基因组
Mitochondrial DNA. 2013 Feb;24(1):19-21. doi: 10.3109/19401736.2012.710230. Epub 2012 Aug 24.
8
The complete mitochondrial genome sequence of the cutlassfish Trichiurus japonicus (Perciformes: Trichiuridae): Genome characterization and phylogenetic considerations.日本带鱼(鲈形目:带鱼科)线粒体全基因组序列:基因组特征及系统发育分析
Mar Genomics. 2009 Jun;2(2):133-42. doi: 10.1016/j.margen.2009.07.003. Epub 2009 Aug 26.
9
Complete nucleotide sequence and gene organization of the mitochondrial genome of Paa spinosa (Anura: Ranoidae).棘胸蛙(无尾目:蛙科)线粒体基因组的完整核苷酸序列和基因组织
Gene. 2009 Nov 15;447(2):86-96. doi: 10.1016/j.gene.2009.07.009. Epub 2009 Jul 22.
10
Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): insight into its phylogenic position within Cyprinidae.草鱼(鲤形目鲤科草鱼属)线粒体全基因组:对其在鲤科中系统发育位置的深入了解
Gene. 2008 Nov 15;424(1-2):96-101. doi: 10.1016/j.gene.2008.07.011. Epub 2008 Jul 18.