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印度云豹的完整线粒体基因组序列()。

Complete mitochondrial genome sequence of the Indian clouded leopard ().

作者信息

Tabasum Wajeeda, Sreenivas Ara, Bheemavarapu Kesav Kumar, Golla Tirupathi Rao, Gaur Ajay

机构信息

Conservation Genetics Lab, LaCONES, CSIR-Centre for Cellular and Molecular Biology, Hyderabad, India.

出版信息

Mitochondrial DNA B Resour. 2016 Sep 5;1(1):621-622. doi: 10.1080/23802359.2016.1214543.

DOI:10.1080/23802359.2016.1214543
PMID:33473573
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800050/
Abstract

The complete mitochondrial genome of sequence 16,859 bp of Indian clouded leopard () has been sequenced using next generation sequencing technology Torrent platform. The complete mitochondrial genome sequence of clouded leopard consists of 13 protein-coding, 22 tRNA, and two rRNA genes and a control region (CR). The mitochondrial genome is relatively similar to other felid mitochondrial genomes with respect to gene arrangement, composition, tRNA structures and skews of AT/GC bases to be typical of those reported for other mammals. The nucleotide composition of the genome shows that there is more A-T% than G-C% on the positive strand as revealed by positive AT and CG skews. The base composition of the mitochondrial genome of clouded leopard is as follows: A, 5362 bp (31.8%); C, 4560bp (27.0%); G, 2475 bp (14.6%); T, 4462 bp (26.4%). Most of the genes have ATG initiation codons, except ND1, ND2, ND3, ND4, ND6, and CYTB (ATA start codon).

摘要

已使用新一代测序技术Torrent平台对印度云豹()16,859bp的完整线粒体基因组进行了测序。云豹的完整线粒体基因组序列由13个蛋白质编码基因、22个tRNA基因、两个rRNA基因和一个控制区(CR)组成。线粒体基因组在基因排列、组成、tRNA结构以及AT/GC碱基偏斜方面与其他猫科动物的线粒体基因组相对相似,是其他哺乳动物所报道的典型特征。基因组的核苷酸组成表明,如正向的AT和CG偏斜所示,正链上的A-T%多于G-C%。云豹线粒体基因组的碱基组成如下:A,5362bp(31.8%);C,4560bp(27.0%);G,2475bp(14.6%);T,4462bp(26.4%)。除ND1、ND2、ND3、ND4、ND6和CYTB(ATA起始密码子)外,大多数基因具有ATG起始密码子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66bb/7800050/be01807e10bf/TMDN_A_1214543_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66bb/7800050/be01807e10bf/TMDN_A_1214543_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66bb/7800050/be01807e10bf/TMDN_A_1214543_F0001_B.jpg

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本文引用的文献

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Clouded leopard phylogeny revisited: support for species recognition and population division between Borneo and Sumatra.重新审视云豹系统发育:支持婆罗洲和苏门答腊之间的物种识别和种群划分
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