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探索全球宏基因组中的塑料降解酶。

Exploring the global metagenome for plastic-degrading enzymes.

机构信息

Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany.

Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany.

出版信息

Methods Enzymol. 2021;648:137-157. doi: 10.1016/bs.mie.2020.12.022. Epub 2021 Jan 20.

Abstract

Plastics are extensively used in our daily life, but they are also a major pollutant of our biosphere accumulating in both the ocean and the land. In the recent years, few enzymes and microorganisms have been discovered with the ability to degrade even fewer synthetic polymers. Nevertheless, more active species and enzymes need to be discovered and described in order to gain more knowledge about protein adaptation to the degradation of not-naturally-occurring polymers. Within this chapter, we focus on efficient methods to identify novel polyethylene terephthalate-degrading enzymes (PETases) from culturable and non-culturable microorganisms by a combination of sequence- and function-based screening. This protocol can be adapted to discover other plastic hydrolases and in general for other enzymes, for which not many characterized specimens are yet available.

摘要

塑料在我们的日常生活中被广泛使用,但它们也是我们生物圈的主要污染物,在海洋和陆地中都有积累。近年来,人们发现了少数几种能够降解某些合成聚合物的酶和微生物。然而,为了更多地了解蛋白质对非天然聚合物降解的适应性,需要发现和描述更多具有活性的物种和酶。在本章中,我们专注于通过基于序列和功能的筛选相结合的方法,从可培养和不可培养的微生物中鉴定有效的新型聚对苯二甲酸乙二醇酯降解酶(PETases)的方法。该方案可以适应于发现其他塑料水解酶,以及一般情况下的其他尚未有大量特征性样本的酶。

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