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原子力显微镜在现代生物学中的应用。

Applications of atomic force microscopy in modern biology.

机构信息

Department of Chemical Sciences, Tata Institute of Fundamental Research, Dr. Homi Bhabha Road, Colaba, Mumbai 400005, India.

出版信息

Emerg Top Life Sci. 2021 May 14;5(1):103-111. doi: 10.1042/ETLS20200255.

DOI:10.1042/ETLS20200255
PMID:33600596
Abstract

Single-molecule force spectroscopy (SMFS) is an emerging tool to investigate mechanical properties of biomolecules and their responses to mechanical forces, and one of the most-used techniques for mechanical manipulation is the atomic force microscope (AFM). AFM was invented as an imaging tool which can be used to image biomolecules in sub-molecular resolution in physiological conditions. It can also be used as a molecular force probe for applying mechanical forces on biomolecules. In this brief review, we will provide exciting examples from recent literature which show how the advances in AFM have enabled us to gain deep insights into mechanical properties and mechanobiology of biomolecules. AFM has been applied to study mechanical properties of cells, tissues, microorganisms, viruses as well as biological macromolecules such as proteins. It has found applications in biomedical fields like cancer biology, where it has been used both in the diagnostic phases as well as drug discovery. AFM has been able to answer questions pertaining to mechanosensing by neurons, and mechanical changes in viruses during infection by the viral particles as well as the fundamental processes such as cell division. Fundamental questions related to protein folding have also been answered by SMFS like determination of energy landscape properties of variety of proteins and their correlation with their biological functions. A multipronged approach is needed to diversify the research, as a combination with optical spectroscopy and computer-based steered molecular dynamic simulations along with SMFS can help us gain further insights into the field of biophysics and modern biology.

摘要

单分子力谱(SMFS)是一种新兴的工具,用于研究生物分子的机械性质及其对机械力的响应,而最常用于机械操作的技术之一是原子力显微镜(AFM)。AFM 最初被发明为一种成像工具,可用于在生理条件下以亚分子分辨率成像生物分子。它也可以用作分子力探针,对生物分子施加机械力。在这篇简短的综述中,我们将提供来自最近文献的令人兴奋的例子,展示 AFM 的进展如何使我们能够深入了解生物分子的机械性质和机械生物学。AFM 已被应用于研究细胞、组织、微生物、病毒以及生物大分子(如蛋白质)的机械性能。它在癌症生物学等生物医学领域有应用,在诊断阶段和药物发现中都有应用。AFM 能够回答有关神经元机械感应的问题,以及病毒在感染过程中机械变化以及细胞分裂等基本过程。SMFS 还回答了与蛋白质折叠相关的基本问题,例如确定各种蛋白质的能量景观特性及其与生物功能的相关性。需要采用多管齐下的方法来使研究多样化,因为与光学光谱学和基于计算机的导向分子动力学模拟相结合的 AFM 可以帮助我们更深入地了解生物物理学和现代生物学领域。

相似文献

1
Applications of atomic force microscopy in modern biology.原子力显微镜在现代生物学中的应用。
Emerg Top Life Sci. 2021 May 14;5(1):103-111. doi: 10.1042/ETLS20200255.
2
Atomic force microscopy as an imaging tool to study the bio/nonbio complexes.原子力显微镜作为一种成像工具,用于研究生物/非生物复合物。
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Single-Molecule Force Spectroscopy: Experiments, Analysis, and Simulations.单分子力谱学:实验、分析与模拟
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Force Spectroscopy in Mechanical Protein Domains Unfolding.力谱在机械蛋白结构域展开中的应用。
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High-Precision Single-Molecule Characterization of the Folding of an HIV RNA Hairpin by Atomic Force Microscopy.原子力显微镜对 HIV RNA 发夹结构折叠的高精度单分子特征分析。
Nano Lett. 2018 Oct 10;18(10):6318-6325. doi: 10.1021/acs.nanolett.8b02597. Epub 2018 Sep 24.
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Biological physics by high-speed atomic force microscopy.高速原子力显微镜下的生物物理学。
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Resolving structure and mechanical properties at the nanoscale of viruses with frequency modulation atomic force microscopy.利用调频原子力显微镜解析病毒的纳米级结构和力学性质。
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Atomic Force Microscopy: Single-Molecule Imaging and Force Spectroscopy in the Study of Flavoproteins Ligand Binding and Reaction Mechanisms.原子力显微镜:在黄素蛋白配体结合和反应机制研究中的单分子成像和力谱学。
Methods Mol Biol. 2021;2280:157-178. doi: 10.1007/978-1-0716-1286-6_10.

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