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吉尔格(百合科)的完整叶绿体基因组

The complete chloroplast genomes of Gilg (Liliaceae).

作者信息

Lee Sang-Choon, Kim Kyunghee, Hwang Yoon-Jung, Lim Ki-Byung, Yang Tae-Jin

机构信息

Department of Plant Science, Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.

Phyzen Genomics Institute, Seongnam-Si, Gyeonggi-Do, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2016 Apr 19;1(1):336-337. doi: 10.1080/23802359.2016.1172052.

Abstract

known as 'Korean wheel lily' and 'Twilight lily', is a lily species naturally distributed in Korea. The complete chloroplast genome sequences of was obtained by assembly using whole-genome next-generation sequencing data. The chloroplast genome of was 152,710 bp in length and consisted of four distinct regions, such as large single-copy region (82,059 bp), small single-copy region (17,619 bp) and a pair of inverted repeat regions (26,516 bp). The genome contained a total of 113 genes, including 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that is most closely related to , a lily species native to Korea.

摘要

被称为“朝鲜卷丹”和“黄昏百合”,是一种自然分布于韩国的百合品种。通过使用全基因组二代测序数据进行组装,获得了其完整的叶绿体基因组序列。该品种的叶绿体基因组长度为152,710 bp,由四个不同区域组成,即大单拷贝区域(82,059 bp)、小单拷贝区域(17,619 bp)和一对反向重复区域(26,516 bp)。该基因组总共包含113个基因,包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。与已报道的叶绿体基因组进行系统发育分析表明,该品种与原产于韩国的百合品种[具体品种名称未给出]关系最为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a617/7871828/6aa66ff355ce/TMDN_A_1172052_F0001_B.jpg

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