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中国吉林百合科绵枣儿属植物的叶绿体全基因组特征及系统发育分析

Characteristics and phylogenetic analysis of the complete chloroplast genome of Salisb. (Liliaceae) from Jilin, China.

作者信息

Lei Fengjie, Zhang Huanrong, Long Yiping, Deng Shengkun, Zhang Aihua

机构信息

College of Chinese Medicinal Materials, Jilin Agricultural University, Changchun, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Dec 10;7(1):30-31. doi: 10.1080/23802359.2021.2006816. eCollection 2022.

DOI:10.1080/23802359.2021.2006816
PMID:34912962
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8667917/
Abstract

Salisb. is a perennial herb with high ornamental and medicinal value in China. The complete chloroplast genome sequence of was assembled using high-throughput sequencing data. The chloroplast genome of is 152,625 bp in length and consists of large single-copy (82,056 bp) and small single-copy (17,585 bp) regions, and a pair of inverted repeat (26,492 bp) regions. A total of 131 genes were annotated, these included 85 protein-coding, 38 tRNA, and eight rRNA genes, with an overall GC content of 37.0%. Phylogenetic analysis with 48 chloroplast genomes fully resolved in a clade with , , and This study further confirmed that chloroplast genomes in the genus are highly conserved, which supports the conclusions from previous reports.

摘要

在中国,梭鱼草是一种具有高观赏和药用价值的多年生草本植物。利用高通量测序数据组装了梭鱼草的完整叶绿体基因组序列。梭鱼草的叶绿体基因组长度为152,625 bp,由大单拷贝区(82,056 bp)、小单拷贝区(17,585 bp)和一对反向重复区(26,492 bp)组成。共注释了131个基因,其中包括85个蛋白质编码基因、38个tRNA基因和8个rRNA基因,总体GC含量为37.0%。对48个叶绿体基因组进行的系统发育分析将梭鱼草完全解析为与[其他几种植物名称]在一个分支中。本研究进一步证实了梭鱼草属中的叶绿体基因组高度保守,这支持了先前报道的结论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b889/8667917/28fef1d55ae6/TMDN_A_2006816_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b889/8667917/28fef1d55ae6/TMDN_A_2006816_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b889/8667917/28fef1d55ae6/TMDN_A_2006816_F0001_B.jpg

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