云亮百合（百合科，百合族）叶绿体全基因组序列及其系统发育分析
The complete chloroplast genome sequence of S. Yun Liang (Liliaceae, Lilieae) and its phylogenetic analysis.
作者信息
Zhou Xuan, Ma Jian-Hua, Zhang Jun-Yi, Luan Li, Li Lin, Gao Yun-Dong, Feng Yu
机构信息
Yajiang Clean Energy Ecological and Environment (Chengdu) Co., Ltd., Chengdu, China.
PowerChina Chengdu Engineering Corporation Limited, Chengdu, China.
出版信息
Mitochondrial DNA B Resour. 2024 Sep 16;9(9):1223-1226. doi: 10.1080/23802359.2024.2403410. eCollection 2024.
is a species of ornamental plant found in southeastern Xizang, China. In the present study, the complete chloroplast (cp) genome of was sequenced using next-generation sequencing (NGS). The assembled cp genome was 151,839 bp in length, including a pair of inverted repeat regions (IRs; 26,421 bp), a small single-copy region (SSC; 17,528 bp), and a large single-copy region (LSC; 81,469 bp). The cp genome encodes 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNA genes, and four rRNA genes. The total GC content of the cp genome was 37.0%. Phylogenetic analysis of 24 cp genomes revealed that was closely related to . This study could provide fundamental information for the phylogenomics and utilization of .
是一种在中国西藏东南部发现的观赏植物。在本研究中，使用下一代测序（NGS）对其完整叶绿体（cp）基因组进行了测序。组装后的cp基因组长度为151,839 bp，包括一对反向重复区域（IRs；26,421 bp）、一个小单拷贝区域（SSC；17,528 bp）和一个大单拷贝区域（LSC；81,469 bp）。cp基因组编码113个独特基因，包括79个蛋白质编码基因（PCGs）、30个tRNA基因和4个rRNA基因。cp基因组的总GC含量为37.0%。对24个cp基因组的系统发育分析表明，与密切相关。本研究可为的系统发育基因组学和利用提供基础信息。
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