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动脉粥样硬化中差异表达mRNA的鉴定揭示CDK6受circHIPK3/miR-637轴调控并促进人血管平滑肌细胞生长。

Identification of Differently Expressed mRNAs in Atherosclerosis Reveals CDK6 Is Regulated by circHIPK3/miR-637 Axis and Promotes Cell Growth in Human Vascular Smooth Muscle Cells.

作者信息

Kang Le, Jia Hao, Huang Ben, Lu Shuyang, Chen Zhenhang, Shen Jinqiang, Zou Yunzeng, Wang Chunsheng, Sun Yongxin

机构信息

Department of Cardiac Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.

Central Laboratory of Cardiovascular Institute, Zhongshan Hospital, Fudan University, Shanghai, China.

出版信息

Front Genet. 2021 Feb 15;12:596169. doi: 10.3389/fgene.2021.596169. eCollection 2021.

Abstract

Atherosclerosis is the leading cause of heart disease and stroke, and one of the leading causes of death and disability worldwide. The phenotypic transformation of vascular smooth muscle cells (VSMCs) plays an important role in the pathological process of atherosclerosis. The present study aimed to identify differently expressed mRNAs in atherosclerosis by analyzing GSE6088 database. Our results revealed there were totally 467 increased and 490 decreased differential expressed genes (DEGs) in atherosclerosis. Bioinformatics analysis demonstrated that the DEGs substantially existed in pathways, including Glyoxylate and dicarboxylate metabolism, Tyrosine metabolism, Tryptophan metabolism, Beta-Alanine metabolism, Fatty acid biosynthesis and Starch and sucrose metabolism. Next, we constructed a protein-protein interaction (PPI) network to identify hub genes in atherosclerosis. Also, we identified CDK6 as a key regulator of atherosclerosis. In this study, we found that CDK6 knockdown suppressed HASMC and HUASMC cell proliferation. Circular RNA (CircRNA) is a non-coding RNA which is reported to have an unusual influence on tumorigenesis process and other aspects in the last few years. Previous studies showed circRNAs could act as miRNAs sponging in multiple biological processes. Bioinformatics prediction and luciferase analysis showed that CDK6 were targeted and regulated by circHIPK3/miR-637. Moreover, silencing circHIPK3 could also significantly induce the arrest and apoptosis of cell cycle. In conclusion, this study discovered the important regulatory role of circHIPK3 in the proliferation and apoptosis of VSMCs by influencing the miR-637/CDK6 axis.

摘要

动脉粥样硬化是心脏病和中风的主要原因,也是全球死亡和残疾的主要原因之一。血管平滑肌细胞(VSMCs)的表型转化在动脉粥样硬化的病理过程中起重要作用。本研究旨在通过分析GSE6088数据库来鉴定动脉粥样硬化中差异表达的mRNA。我们的结果显示,在动脉粥样硬化中共有467个基因表达增加,490个基因表达减少。生物信息学分析表明,差异表达基因主要存在于乙醛酸和二羧酸代谢、酪氨酸代谢、色氨酸代谢、β-丙氨酸代谢、脂肪酸生物合成以及淀粉和蔗糖代谢等通路中。接下来,我们构建了蛋白质-蛋白质相互作用(PPI)网络以鉴定动脉粥样硬化中的枢纽基因。此外,我们鉴定出CDK6是动脉粥样硬化的关键调节因子。在本研究中,我们发现敲低CDK6可抑制人主动脉平滑肌细胞(HASMC)和人脐动脉平滑肌细胞(HUASMC)的增殖。环状RNA(CircRNA)是一种非编码RNA,在过去几年中据报道对肿瘤发生过程及其他方面有不同寻常的影响。先前的研究表明,circRNAs在多个生物学过程中可作为miRNAs的海绵。生物信息学预测和荧光素酶分析表明,CDK6受circHIPK3/miR-637靶向调控。此外,沉默circHIPK3也可显著诱导细胞周期停滞和凋亡。总之,本研究发现circHIPK3通过影响miR-637/CDK6轴在血管平滑肌细胞的增殖和凋亡中发挥重要调节作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2cd2/7917241/2bb0f017c98d/fgene-12-596169-g001.jpg

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