Almela Pablo, Justel Ana, Quesada Antonio
Department of Biology, Universidad Autónoma de Madrid, Madrid, Spain.
Department of Mathematics, Universidad Autónoma de Madrid, Madrid, Spain.
Front Microbiol. 2021 Feb 16;12:628792. doi: 10.3389/fmicb.2021.628792. eCollection 2021.
Ice-free areas represent less than 1% of the Antarctic surface. However, climate change models predict a significant increase in temperatures in the coming decades, triggering a relevant reduction of the ice-covered surface. Microorganisms, adapted to the extreme and fluctuating conditions, are the dominant biota. In this article we analyze the diversity and composition of soil bacterial communities in 52 soil samples on three scales: (i) fine scale, where we compare the differences in the microbial community between top-stratum soils (0-2 cm) and deeper-stratum soils (5-10 cm) at the same sampling point; (ii) medium scale, in which we compare the composition of the microbial community of top-stratum soils from different sampling points within the same sampling location; and (iii) coarse scale, where we compare communities between comparable ecosystems located hundreds of kilometers apart along the Antarctic Peninsula. The results suggest that in ice-free soils exposed for longer periods of time (millennia) microbial communities are significantly different along the soil profiles. However, in recently (decades) deglaciated soils the communities are not different along the soil profile. Furthermore, the microbial communities found in soils at the different sampling locations show a high degree of heterogeneity, with a relevant proportion of unique amplicon sequence variants (ASV) that appeared mainly in low abundance, and only at a single sampling location. The Core90 community, defined as the ASVs shared by 90% of the soils from the 4 sampling locations, was composed of 26 ASVs, representing a small percentage of the total sequences. Nevertheless, the taxonomic composition of the Core80 (ASVs shared by 80% of sampling points per location) of the different sampling locations, was very similar, as they were mostly defined by 20 common taxa, representing up to 75.7% of the sequences of the Core80 communities, suggesting a greater homogeneity of soil bacterial taxa among distant locations.
无冰区域占南极表面面积不到1%。然而,气候变化模型预测,在未来几十年气温将显著上升,导致冰雪覆盖面积相应减少。适应极端和多变条件的微生物是主要生物群。在本文中,我们从三个尺度分析了52个土壤样本中土壤细菌群落的多样性和组成:(i)精细尺度,即比较同一采样点上层土壤(0-2厘米)和深层土壤(5-10厘米)之间微生物群落的差异;(ii)中等尺度,即比较同一采样区域内不同采样点上层土壤微生物群落的组成;(iii)粗略尺度,即比较沿南极半岛相距数百公里的类似生态系统之间的群落。结果表明,在长时间(数千年)暴露的无冰土壤中,微生物群落在土壤剖面中存在显著差异。然而,在最近(数十年)冰川消退的土壤中,群落沿土壤剖面没有差异。此外,在不同采样地点的土壤中发现的微生物群落表现出高度的异质性,有相当比例的独特扩增子序列变体(ASV)主要以低丰度出现,且仅在单个采样地点出现。核心90群落定义为来自4个采样地点90%的土壤共有的ASV,由26个ASV组成,占总序列的比例很小。然而,不同采样地点的核心80(每个地点80%的采样点共有的ASV)的分类组成非常相似,因为它们大多由20个常见分类群定义,占核心80群落序列的75.7%,这表明遥远地点之间土壤细菌分类群具有更高的同质性。