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斯蒂芬氏(Steph.)1897年的完整线粒体基因组(合叶苔科,叶苔目)

The complete mitochondrial genome of Steph., 1897 (Scapaniaceae, Jungermanniales).

作者信息

Choi Seung Se, Min Juhyeon, Kwon Woochan, Park Jongsun

机构信息

Team of National Ecosystem survey, National Institute of Ecology, Seocheon, Republic of Korea.

InfoBoss Inc., Seoul, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 1;6(2):686-688. doi: 10.1080/23802359.2021.1882892.

Abstract

Steph. is the endemic species in East Asia. To investigate intraspecific variations on mitochondrial genomes of , we completed mitochondrial genome of isolated in Korea. It is 143,664 bp long and contains 73 genes (41 protein-coding genes, three rRNAs, 28 tRNAs, and one pseudogene). 823 single nucleotide polymorphisms (SNPs; 0.057%) and 2,242 insertions and deletions were identified between two mitochondrial genomes, which is large number of intraspecific variations in comparison to the other cases of Bryophyte mitochondrial genomes. Phylogenetic trees show that is clustered with those of two species with high supportive values.

摘要

Steph.是东亚的特有物种。为了研究其线粒体基因组的种内变异,我们完成了在韩国分离的该物种的线粒体基因组测序。它长143,664 bp,包含73个基因(41个蛋白质编码基因、3个rRNA、28个tRNA和1个假基因)。在两个该物种的线粒体基因组之间鉴定出823个单核苷酸多态性(SNP;0.057%)和2242个插入缺失,与苔藓植物线粒体基因组的其他案例相比,这是大量的种内变异。系统发育树显示,该物种与另外两个物种聚类,支持率很高。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c9f9/7928006/505bf4073778/TMDN_A_1882892_F0001_B.jpg

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