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深度学习网络中图像增强技术对COVID-19检测的有效性:几何变换视角

The Effectiveness of Image Augmentation in Deep Learning Networks for Detecting COVID-19: A Geometric Transformation Perspective.

作者信息

Elgendi Mohamed, Nasir Muhammad Umer, Tang Qunfeng, Smith David, Grenier John-Paul, Batte Catherine, Spieler Bradley, Leslie William Donald, Menon Carlo, Fletcher Richard Ribbon, Howard Newton, Ward Rabab, Parker William, Nicolaou Savvas

机构信息

Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, MB, Canada.

School of Mechatronic Systems Engineering, Simon Fraser University, Burnaby, BC, Canada.

出版信息

Front Med (Lausanne). 2021 Mar 1;8:629134. doi: 10.3389/fmed.2021.629134. eCollection 2021.

Abstract

Chest X-ray imaging technology used for the early detection and screening of COVID-19 pneumonia is both accessible worldwide and affordable compared to other non-invasive technologies. Additionally, deep learning methods have recently shown remarkable results in detecting COVID-19 on chest X-rays, making it a promising screening technology for COVID-19. Deep learning relies on a large amount of data to avoid overfitting. While overfitting can result in perfect modeling on the original training dataset, on a new testing dataset it can fail to achieve high accuracy. In the image processing field, an image augmentation step (i.e., adding more training data) is often used to reduce overfitting on the training dataset, and improve prediction accuracy on the testing dataset. In this paper, we examined the impact of geometric augmentations as implemented in several recent publications for detecting COVID-19. We compared the performance of 17 deep learning algorithms with and without different geometric augmentations. We empirically examined the influence of augmentation with respect to detection accuracy, dataset diversity, augmentation methodology, and network size. Contrary to expectation, our results show that the removal of recently used geometrical augmentation steps actually improved the Matthews correlation coefficient (MCC) of 17 models. The MCC without augmentation (MCC = 0.51) outperformed four recent geometrical augmentations (MCC = 0.47 for Data Augmentation 1, MCC = 0.44 for Data Augmentation 2, MCC = 0.48 for Data Augmentation 3, and MCC = 0.49 for Data Augmentation 4). When we retrained a recently published deep learning without augmentation on the same dataset, the detection accuracy significantly increased, with a and a -value of 2.23 × 10. This is an interesting finding that may improve current deep learning algorithms using geometrical augmentations for detecting COVID-19. We also provide clinical perspectives on geometric augmentation to consider regarding the development of a robust COVID-19 X-ray-based detector.

摘要

与其他非侵入性技术相比,用于COVID-19肺炎早期检测和筛查的胸部X光成像技术在全球范围内均可获取且成本较低。此外,深度学习方法最近在通过胸部X光检测COVID-19方面取得了显著成果,使其成为一种有前景的COVID-19筛查技术。深度学习依赖大量数据以避免过拟合。虽然过拟合可能会在原始训练数据集上实现完美建模,但在新的测试数据集上可能无法达到高精度。在图像处理领域,通常会采用图像增强步骤(即添加更多训练数据)来减少训练数据集上的过拟合,并提高测试数据集上的预测准确性。在本文中,我们研究了近期几篇用于检测COVID-19的文献中所实施的几何增强的影响。我们比较了有不同几何增强和无几何增强情况下17种深度学习算法的性能。我们通过实验研究了增强对检测准确性、数据集多样性、增强方法和网络规模的影响。与预期相反,我们的结果表明,去除最近使用的几何增强步骤实际上提高了17个模型的马修斯相关系数(MCC)。无增强情况下的MCC(MCC = 0.51)优于最近的四种几何增强(数据增强1的MCC = 0.47,数据增强2的MCC = 0.44,数据增强3的MCC = 0.48,数据增强4的MCC = 0.49)。当我们在同一数据集上对最近发表的无增强深度学习模型进行重新训练时,检测准确性显著提高, 以及 值为2.23×10。这是一个有趣的发现,可能会改进当前使用几何增强来检测COVID-19的深度学习算法。我们还提供了关于几何增强的临床观点,以供在开发基于COVID-19 X光的强大检测器时参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f4a/7956964/f9c2a6fdc512/fmed-08-629134-g0001.jpg

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