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沿丝呈现出稳健、连贯且同步的生物钟控制的震荡。

Robust, coherent, and synchronized circadian clock-controlled oscillations along filaments.

机构信息

Department of Physics of Complex Systems, Weizmann Institute of Science, Rehovot, Israel.

Dipartimento di Fisica e Astronomia, Università di Firenze, INFN and CSDC, Sesto Fiorentino, Italy.

出版信息

Elife. 2021 Mar 22;10:e64348. doi: 10.7554/eLife.64348.

Abstract

Circadian clocks display remarkable reliability despite significant stochasticity in biomolecular reactions. We study the dynamics of a circadian clock-controlled gene at the individual cell level in sp. PCC 7120, a multicellular filamentous cyanobacterium. We found significant synchronization and spatial coherence along filaments, clock coupling due to cell-cell communication, and gating of the cell cycle. Furthermore, we observed low-amplitude circadian oscillatory transcription of genes encoding the post-transcriptional core oscillatory circuit and high-amplitude oscillations of coding for the master regulator transducing the core clock output. Transcriptional oscillations of suggest an additional level of regulation. A stochastic one-dimensional toy model of coupled clock cores and their phosphorylation states shows that demographic noise can seed stochastic oscillations outside the region where deterministic limit cycles with circadian periods occur. The model reproduces the observed spatio-temporal coherence along filaments and provides a robust description of coupled circadian clocks in a multicellular organism.

摘要

尽管生物分子反应存在显著的随机性,昼夜节律钟仍显示出非凡的可靠性。我们在 sp. PCC 7120 中研究了昼夜节律钟控制的基因在单细胞水平上的动力学,sp. PCC 7120 是一种多细胞丝状蓝细菌。我们发现沿丝状纤维存在显著的同步和空间相干性,由于细胞间通讯导致的时钟耦合,以及细胞周期的门控。此外,我们观察到编码后转录核心振荡电路的基因的低幅度昼夜振荡转录和编码主调节剂的基因的高幅度振荡,主调节剂将核心时钟输出转换。的转录振荡表明存在额外的调节水平。耦合时钟核心及其磷酸化状态的随机一维玩具模型表明,人口噪声可以在具有昼夜周期的确定性极限环出现的区域之外引发随机振荡。该模型再现了沿丝状纤维观察到的时空相干性,并为多细胞生物中的耦合昼夜钟提供了稳健的描述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c7b5/8064755/c11f8d7413c2/elife-64348-fig1.jpg

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