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新物种,从国际空间站分离得到。

sp. nov., Isolated From the International Space Station.

作者信息

Bijlani Swati, Singh Nitin K, Eedara V V Ramprasad, Podile Appa Rao, Mason Christopher E, Wang Clay C C, Venkateswaran Kasthuri

机构信息

Department of Pharmacology and Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA, United States.

Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, United States.

出版信息

Front Microbiol. 2021 Mar 15;12:639396. doi: 10.3389/fmicb.2021.639396. eCollection 2021.

Abstract

Four strains belonging to the family of were isolated from different locations on the International Space Station (ISS) across two consecutive flights. Of these, three were identified as Gram-negative, rod-shaped, catalase-positive, oxidase-positive, motile bacteria, designated as IF7SW-B2, IIF1SW-B5, and IIF4SW-B5, whereas the fourth was identified as . The sequence similarity of these three ISS strains, designated as IF7SW-B2, IIF1SW-B5, and IIF4SW-B5, was <99.4% for 16S rRNA genes and <97.3% for gene, with the closest being SE2.11. Furthermore, the multi-locus sequence analysis placed these three ISS strains in the same clade of The average nucleotide identity (ANI) values of these three ISS strains were <93% and digital DNA-DNA hybridization (dDDH) values were <46.4% with any described species. Based on the ANI and dDDH analyses, these three ISS strains were considered as novel species belonging to the genus The three ISS strains showed 100% ANI similarity and dDDH values with each other, indicating that these three ISS strains, isolated during various flights and from different locations, belong to the same species. These three ISS strains were found to grow optimally at temperatures from 25 to 30°C, pH 6.0 to 8.0, and NaCl 0 to 1%. Phenotypically, these three ISS strains resemble and since they assimilate similar sugars as sole carbon substrate when compared to other species. Fatty acid analysis showed that the major fatty acid produced by the ISS strains are C -ω7 and C -ω6. The predominant quinone was ubiquinone 10, and the major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, and an unidentified lipid. Therefore, based on genomic, phylogenetic, biochemical, and fatty acid analyses, strains IF7SW-B2, IIF1SW-B5, and IIF4SW-B5, are assigned to a novel species within the genus , and the name sp. nov. is proposed. The type strain is IF7SW-B2 (NRRL B-65601 and LMG 32165).

摘要

在连续两次飞行中,从国际空间站(ISS)的不同位置分离出了四株属于[具体菌科名称未给出]菌科的菌株。其中,三株被鉴定为革兰氏阴性、杆状、过氧化氢酶阳性、氧化酶阳性、可运动的细菌,分别命名为IF7SW - B2、IIF1SW - B5和IIF4SW - B5,而第四株被鉴定为[具体名称未给出]。这三株国际空间站菌株(IF7SW - B2、IIF1SW - B5和IIF4SW - B5)的16S rRNA基因序列相似性<99.4%,[具体基因名称未给出]基因序列相似性<97.3%,与最接近的[具体菌株名称未给出]SE2.11相似。此外,多位点序列分析将这三株国际空间站菌株置于[具体属名称未给出]的同一进化枝中。这三株国际空间站菌株与任何已描述的[具体属名称未给出]物种的平均核苷酸同一性(ANI)值<93%,数字DNA - DNA杂交(dDDH)值<46.4%。基于ANI和dDDH分析,这三株国际空间站菌株被认为是属于[具体属名称未给出]属的新物种。这三株国际空间站菌株彼此之间显示出100%的ANI相似性和dDDH值,表明这些在不同飞行期间和不同位置分离出的三株国际空间站菌株属于同一物种。发现这三株国际空间站菌株在25至30°C、pH 6.0至8.0和NaCl 0至1%的条件下生长最佳。从表型上看,这三株国际空间站菌株类似于[具体物种名称未给出]和[具体物种名称未给出],因为与其他[具体属名称未给出]物种相比,它们将相似的糖类作为唯一碳源进行同化。脂肪酸分析表明,国际空间站菌株产生的主要脂肪酸是C -ω7和C -ω6。主要醌类是泛醌10,主要极性脂质是二磷脂酰甘油、磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰甘油和一种未鉴定的脂质。因此,基于基因组、系统发育、生化和脂肪酸分析,菌株IF7SW - B2、IIF1SW - B5和IIF4SW - B5被归入[具体属名称未给出]属内的一个新物种,并提议命名为[具体新物种名称未给出] sp. nov.。模式菌株是IF7SW - B2(NRRL B - 65601和LMG 32165)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d23/8005752/c21b5f11d30b/fmicb-12-639396-g001.jpg

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