Lomonosov Institute of Fine Chemical Technologies, MIREA-Russian Technological University, Vernadskogo pr. 86, 119571 Moscow, Russia.
Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona, Spain.
Int J Mol Sci. 2021 Mar 23;22(6):3285. doi: 10.3390/ijms22063285.
Arachidonic acid lipoxygenases (ALOXs) have been suggested to function as monomeric enzymes, but more recent data on rabbit ALOX15 indicated that there is a dynamic monomer-dimer equilibrium in aqueous solution. In the presence of an active site ligand (the ALOX15 inhibitor RS7) rabbit ALOX15 was crystalized as heterodimer and the X-ray coordinates of the two monomers within the dimer exhibit subtle structural differences. Using native polyacrylamide electrophoresis, we here observed that highly purified and predominantly monomeric rabbit ALOX15 and human ALOX15B are present in two conformers with distinct electrophoretic mobilities. In silico docking studies, molecular dynamics simulations, site directed mutagenesis experiments and kinetic measurements suggested that in aqueous solutions the two enzymes exhibit motional flexibility, which may impact the enzymatic properties.
花生四烯酸脂氧合酶(ALOXs)被认为是单体酶,但最近关于兔 ALOX15 的数据表明,在水溶液中存在动态的单体-二聚体平衡。在活性位点配体(ALOX15 抑制剂 RS7)的存在下,兔 ALOX15 被结晶为异二聚体,二聚体中两个单体的 X 射线坐标显示出细微的结构差异。使用天然聚丙烯酰胺电泳,我们在这里观察到高度纯化且主要为单体的兔 ALOX15 和人 ALOX15B 以两种具有不同电泳迁移率的构象存在。计算机对接研究、分子动力学模拟、定点突变实验和动力学测量表明,在水溶液中,两种酶表现出运动灵活性,这可能影响酶的性质。