• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

ssGSEA 和质谱流式细胞术的联合应用鉴定肌层浸润性膀胱癌中的免疫微环境。

A combination of ssGSEA and mass cytometry identifies immune microenvironment in muscle-invasive bladder cancer.

机构信息

Center for Genomic and Personalized Medicine, Guangxi Medical University, Nanning, China.

Guangxi Key Laboratory for Genomic and Personalized Medicine, Guangxi, Collaborative Innovation Center for Genomic and Personalized Medicine, Nanning, China.

出版信息

J Clin Lab Anal. 2021 May;35(5):e23754. doi: 10.1002/jcla.23754. Epub 2021 Apr 4.

DOI:10.1002/jcla.23754
PMID:33813769
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8128294/
Abstract

BACKGROUND

Muscle-invasive bladder cancer (MIBC) is a heterogeneous disease with varying clinical courses and responses to treatment. To improve the prognosis of patients, it is necessary to understand such heterogeneity.

METHODS

We used single-sample gene set enrichment analysis to classify 35 MIBC cases into immunity-high and immunity-low groups. Bioinformatics analyses were conducted to compare the differences between these groups. Eventually, single-cell mass cytometry (CyTOF) was used to compare the characteristics of the immune microenvironment between the patients in the two groups.

RESULTS

Compared with patients in the immunity-low group, patients in the immunity-high group had a higher number of tumor-infiltrating immune cells and greater enrichment of gene sets associated with antitumor immune activity. Furthermore, positive immune response-related pathways were more enriched in the immunity-high group. We identified 26 immune cell subsets, including cytotoxic T cells (Tcs), helper T cells (Ths), regulatory T cells (Tregs), B cells, macrophages, natural killer (NK) cells, and dendritic cells (DCs) using CyTOF. Furthermore, there was a higher proportion of CD45+ lymphocytes and enrichment of one Tc subset in the immunity-high group. Additionally, M2 macrophages were highly enriched in the immunity-low group. Finally, there was higher expression of PD-1 and Tim-3 on Tregs as well as a higher proportion of PD-1+ Tregs in the immunity-low group than in the immunity-high group.

CONCLUSION

In summary, the immune microenvironments of the immunity-high and immunity-low groups of patients with MIBC are heterogeneous. Specifically, immune suppression was observed in the immune microenvironment of the patients in the immunity-low group.

摘要

背景

肌层浸润性膀胱癌(MIBC)是一种异质性疾病,其临床病程和对治疗的反应各不相同。为了改善患者的预后,有必要了解这种异质性。

方法

我们使用单样本基因集富集分析将 35 例 MIBC 病例分为免疫高和免疫低两组。进行生物信息学分析以比较两组之间的差异。最后,使用单细胞质谱流式细胞术(CyTOF)比较两组患者的免疫微环境特征。

结果

与免疫低组患者相比,免疫高组患者的肿瘤浸润免疫细胞数量更多,与抗肿瘤免疫活性相关的基因集富集程度更高。此外,免疫高组中阳性免疫反应相关通路更为丰富。我们使用 CyTOF 鉴定了 26 种免疫细胞亚群,包括细胞毒性 T 细胞(Tc)、辅助性 T 细胞(Th)、调节性 T 细胞(Treg)、B 细胞、巨噬细胞、自然杀伤(NK)细胞和树突状细胞(DC)。此外,免疫高组中 CD45+淋巴细胞比例较高,且 Tc 亚群富集。此外,免疫低组中 M2 巨噬细胞高度富集。最后,免疫低组 Tregs 上 PD-1 和 Tim-3 的表达较高,且 PD-1+Tregs 的比例较高。

结论

总之,MIBC 患者免疫高和免疫低组的免疫微环境存在异质性。具体来说,免疫低组患者的免疫微环境中存在免疫抑制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/307d4ed497a3/JCLA-35-e23754-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/98487084dc0b/JCLA-35-e23754-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/d0f3398b4a90/JCLA-35-e23754-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/e06914372274/JCLA-35-e23754-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/a2fb25033f2e/JCLA-35-e23754-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/307d4ed497a3/JCLA-35-e23754-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/98487084dc0b/JCLA-35-e23754-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/d0f3398b4a90/JCLA-35-e23754-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/e06914372274/JCLA-35-e23754-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/a2fb25033f2e/JCLA-35-e23754-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9f1/8128294/307d4ed497a3/JCLA-35-e23754-g006.jpg

相似文献

1
A combination of ssGSEA and mass cytometry identifies immune microenvironment in muscle-invasive bladder cancer.ssGSEA 和质谱流式细胞术的联合应用鉴定肌层浸润性膀胱癌中的免疫微环境。
J Clin Lab Anal. 2021 May;35(5):e23754. doi: 10.1002/jcla.23754. Epub 2021 Apr 4.
2
Multi-omics analysis unveils the predictive value of IGF2BP3/SPHK1 signaling in cancer stem cells for prognosis and immunotherapeutic response in muscle-invasive bladder cancer.多组学分析揭示了 IGF2BP3/SPHK1 信号在肌层浸润性膀胱癌肿瘤干细胞中对预后和免疫治疗反应的预测价值。
J Transl Med. 2024 Oct 4;22(1):900. doi: 10.1186/s12967-024-05685-8.
3
An immune relevant signature for predicting prognoses and immunotherapeutic responses in patients with muscle-invasive bladder cancer (MIBC).一种用于预测肌层浸润性膀胱癌(MIBC)患者预后和免疫治疗反应的免疫相关特征。
Cancer Med. 2020 Apr;9(8):2774-2790. doi: 10.1002/cam4.2942. Epub 2020 Feb 25.
4
Immune Cell Confrontation in the Papillary Thyroid Carcinoma Microenvironment.甲状腺乳头状癌微环境中的免疫细胞对抗。
Front Endocrinol (Lausanne). 2020 Oct 22;11:570604. doi: 10.3389/fendo.2020.570604. eCollection 2020.
5
Tumor‑infiltrating M2 macrophages driven by specific genomic alterations are associated with prognosis in bladder cancer.特定基因组改变驱动的肿瘤浸润性 M2 巨噬细胞与膀胱癌的预后相关。
Oncol Rep. 2019 Aug;42(2):581-594. doi: 10.3892/or.2019.7196. Epub 2019 Jun 12.
6
CD19 tumor-infiltrating B-cells prime CD4 T-cell immunity and predict platinum-based chemotherapy efficacy in muscle-invasive bladder cancer.CD19 肿瘤浸润 B 细胞激发 CD4 T 细胞免疫反应,并预测肌层浸润性膀胱癌对铂类化疗的疗效。
Cancer Immunol Immunother. 2019 Jan;68(1):45-56. doi: 10.1007/s00262-018-2250-9. Epub 2018 Sep 26.
7
CCR8 blockade primes anti-tumor immunity through intratumoral regulatory T cells destabilization in muscle-invasive bladder cancer.CCR8 阻断通过肿瘤内调节性 T 细胞的不稳定性在肌肉浸润性膀胱癌中引发抗肿瘤免疫。
Cancer Immunol Immunother. 2020 Sep;69(9):1855-1867. doi: 10.1007/s00262-020-02583-y. Epub 2020 May 4.
8
Tumor-associated macrophages expressing galectin-9 identify immunoevasive subtype muscle-invasive bladder cancer with poor prognosis but favorable adjuvant chemotherapeutic response.肿瘤相关巨噬细胞表达半乳糖凝集素-9可识别免疫逃避型肌层浸润性膀胱癌,此类膀胱癌预后不良,但对辅助化疗反应良好。
Cancer Immunol Immunother. 2019 Dec;68(12):2067-2080. doi: 10.1007/s00262-019-02429-2. Epub 2019 Nov 12.
9
Genomic stratification based on microenvironment immune types and PD-L1 for tailoring therapeutic strategies in bladder cancer.基于微环境免疫类型和程序性死亡受体配体1(PD-L1)的基因组分层,用于定制膀胱癌的治疗策略。
BMC Cancer. 2021 May 31;21(1):646. doi: 10.1186/s12885-021-08350-1.
10
Molecular, Immunological, and Clinical Features Associated With Lymphoid Neogenesis in Muscle Invasive Bladder Cancer.与肌层浸润性膀胱癌中淋巴生成相关的分子、免疫和临床特征。
Front Immunol. 2022 Jan 25;12:793992. doi: 10.3389/fimmu.2021.793992. eCollection 2021.

引用本文的文献

1
Recent contributions of single-cell and spatial profiling to the understanding of bladder cancer.单细胞和空间分析技术对膀胱癌研究的最新贡献。
Curr Opin Urol. 2024 Jul 1;34(4):236-243. doi: 10.1097/MOU.0000000000001183. Epub 2024 Apr 22.
2
A ferroptosis-related LncRNAs signature for predicting prognoses and screening potential therapeutic drugs in patients with lung adenocarcinoma: A retrospective study.一种用于预测肺腺癌患者预后和筛选潜在治疗药物的铁死亡相关长链非编码RNA特征:一项回顾性研究。
Cancer Rep (Hoboken). 2024 Jan;7(1):e1925. doi: 10.1002/cnr2.1925. Epub 2023 Dec 3.
3
-related signature for predicting prognosis and tumor microenvironment characteristics in bladder cancer: A multi-omics study.

本文引用的文献

1
Integrated RNA Sequencing and Single-Cell Mass Cytometry Reveal a Novel Role of LncRNA HOXA-AS2 in Tumorigenesis and Stemness of Hepatocellular Carcinoma.整合RNA测序和单细胞质谱流式细胞术揭示长链非编码RNA HOXA-AS2在肝细胞癌发生和干性中的新作用。
Onco Targets Ther. 2020 Oct 27;13:10901-10916. doi: 10.2147/OTT.S272717. eCollection 2020.
2
Prognostic and Predictive Value of Tumor-Infiltrating Immune Cells in Urothelial Cancer of the Bladder.膀胱尿路上皮癌中肿瘤浸润免疫细胞的预后及预测价值
Cancers (Basel). 2020 Sep 21;12(9):2692. doi: 10.3390/cancers12092692.
3
Mining TCGA database for tumor mutation burden and their clinical significance in bladder cancer.
用于预测膀胱癌预后和肿瘤微环境特征的相关特征:一项多组学研究
Front Genet. 2022 Dec 9;13:1057302. doi: 10.3389/fgene.2022.1057302. eCollection 2022.
4
Intratumoral immune heterogeneity of prostate cancer characterized by typing and hub genes.肿瘤内前列腺癌免疫异质性的特征在于分型和枢纽基因。
J Cell Mol Med. 2023 Jan;27(1):101-112. doi: 10.1111/jcmm.17641. Epub 2022 Dec 16.
5
Single-cell sequencing technologies in bladder cancer research: Applications and challenges.膀胱癌研究中的单细胞测序技术:应用与挑战
Front Genet. 2022 Oct 19;13:1027909. doi: 10.3389/fgene.2022.1027909. eCollection 2022.
6
m7G-Associated subtypes, tumor microenvironment, and validation of prognostic signature in lung adenocarcinoma.m7G相关亚型、肿瘤微环境及肺腺癌预后特征的验证
Front Genet. 2022 Aug 10;13:954840. doi: 10.3389/fgene.2022.954840. eCollection 2022.
7
Identification of m6A- and ferroptosis-related lncRNA signature for predicting immune efficacy in hepatocellular carcinoma.m6A 和铁死亡相关 lncRNA 特征鉴定用于预测肝细胞癌的免疫疗效。
Front Immunol. 2022 Aug 11;13:914977. doi: 10.3389/fimmu.2022.914977. eCollection 2022.
8
Identification of an immune gene-associated prognostic signature in patients with bladder cancer.鉴定膀胱癌患者免疫基因相关的预后特征。
Cancer Gene Ther. 2022 May;29(5):494-504. doi: 10.1038/s41417-022-00438-5. Epub 2022 Feb 15.
9
Proteomics as a Complementary Technique to Characterize Bladder Cancer.蛋白质组学作为一种用于表征膀胱癌的补充技术。
Cancers (Basel). 2021 Nov 4;13(21):5537. doi: 10.3390/cancers13215537.
从 TCGA 数据库挖掘肿瘤突变负荷及其在膀胱癌中的临床意义。
Biosci Rep. 2020 Apr 30;40(4). doi: 10.1042/BSR20194337.
4
An immune relevant signature for predicting prognoses and immunotherapeutic responses in patients with muscle-invasive bladder cancer (MIBC).一种用于预测肌层浸润性膀胱癌(MIBC)患者预后和免疫治疗反应的免疫相关特征。
Cancer Med. 2020 Apr;9(8):2774-2790. doi: 10.1002/cam4.2942. Epub 2020 Feb 25.
5
Use of Mass Cytometry to Profile Human T Cell Exhaustion.应用液质联用技术分析人 T 细胞耗竭。
Front Immunol. 2020 Jan 22;10:3039. doi: 10.3389/fimmu.2019.03039. eCollection 2019.
6
Identification of an immunotherapy-responsive molecular subtype of bladder cancer.鉴定膀胱癌免疫治疗反应的分子亚型。
EBioMedicine. 2019 Dec;50:238-245. doi: 10.1016/j.ebiom.2019.10.058. Epub 2019 Nov 15.
7
A Consensus Molecular Classification of Muscle-invasive Bladder Cancer.肌肉浸润性膀胱癌的共识分子分类。
Eur Urol. 2020 Apr;77(4):420-433. doi: 10.1016/j.eururo.2019.09.006. Epub 2019 Sep 26.
8
Next-generation computational tools for interrogating cancer immunity.用于探索癌症免疫的下一代计算工具。
Nat Rev Genet. 2019 Dec;20(12):724-746. doi: 10.1038/s41576-019-0166-7. Epub 2019 Sep 12.
9
Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype.基于图的基因组比对和基因分型与 HISAT2 和 HISAT-genotype。
Nat Biotechnol. 2019 Aug;37(8):907-915. doi: 10.1038/s41587-019-0201-4. Epub 2019 Aug 2.
10
Management of metastatic bladder cancer.转移性膀胱癌的治疗管理。
Cancer Treat Rev. 2019 Jun;76:10-21. doi: 10.1016/j.ctrv.2019.04.002. Epub 2019 Apr 15.