Yamamoto Kazuo, Toya Shotaro, Sabidi Sarah, Hoshiko Yuki, Maeda Toshinari
Department of Biological Functions Engineering, Graduate School of Life Science and Systems Engineering, Kyushu Institute of Technology, Wakamatsu-Ku, Kitakyushu, Japan.
Appl Microbiol Biotechnol. 2021 May;105(9):3787-3798. doi: 10.1007/s00253-021-11248-4. Epub 2021 Apr 15.
Because colony formation is essential to seek bacterial functions by the direct observation of phenotype, the diversification of colony formation for culturable bacteria is a big challenge in the research field of Environmental Biotechnology. In this study, the biodiversity of cultivable bacteria (colony or liquid culture) was compared by using Luria-Bertani (LB) medium and waste sewage sludge (WSS) under different dilutions and temperatures. When WSS was used as a bacterial source, whereas the highest number of colonies was found at the concentration of WSS (5%), a particular concentration of LB (10%) or WSS (1%) as a growth medium showed the best number of the operational taxonomic units (OTUs) of colonies. The results of bacterial community structure indicated that there are 1, 8, and 12 bacterial genera found uniquely in the agar plates of LB, 10% LB, and 5% WSS. By contrast, when palm oil mill effluent sludge was used as a bacterial source, the effect of dilution was different with WSS. When comparing the biodiversity between colonies and liquid culture, a high OTU value was observed in the colonies on the plate. In addition, 30°C showed the highest number of colonies in LB, 10% LB, and 5% WSS whereas the best OTUs were observed at 37°C for LB and 10% LB, and at 25°C for 5% WSS. This study demonstrates the diversification of cultivable bacteria through the number of OTUs in diluted LB medium and WSS, which is beneficial to isolate a unique bacterial strain.Key points• Impacts of diluted LB medium and WSS for colony formation were determined.• Difference of concentration of LB and WSS made different effects on colony formation.• Temperature change affected on diluted LB and WSS as media.
由于菌落形成对于通过直接观察表型来探寻细菌功能至关重要,因此可培养细菌菌落形成的多样化是环境生物技术研究领域的一大挑战。在本研究中,使用卢里亚-伯坦(LB)培养基和不同稀释度及温度下的污水污泥(WSS),比较了可培养细菌(菌落或液体培养物)的生物多样性。当使用WSS作为细菌来源时,尽管在WSS浓度为5%时发现的菌落数量最多,但特定浓度的LB(10%)或WSS(1%)作为生长培养基时,显示出最佳的菌落操作分类单元(OTU)数量。细菌群落结构的结果表明,在LB、10%LB和5%WSS的琼脂平板中分别独特地发现了1、8和12个细菌属。相比之下,当使用棕榈油厂废水污泥作为细菌来源时,稀释的影响与WSS不同。在比较菌落和液体培养物之间的生物多样性时,平板上的菌落中观察到较高的OTU值。此外,30°C时LB、10%LB和5%WSS中的菌落数量最多,而对于LB和10%LB,在37°C时观察到最佳的OTU,对于5%WSS,在25°C时观察到最佳的OTU。本研究通过稀释的LB培养基和WSS中OTU的数量证明了可培养细菌的多样化,这有利于分离独特的细菌菌株。
关键点
• 确定了稀释的LB培养基和WSS对菌落形成的影响。
• LB和WSS浓度的差异对菌落形成产生不同影响。
• 温度变化对作为培养基的稀释LB和WSS有影响。