Bayatiani Mohammad Reza, Ahmadi Azam, Aghabozorgi Reza, Seif Fatemeh
Department of Radiotherapy and Medical Physics, Arak University of Medical Sciences, Arak, Iran.
Infectious Diseases Research Center (IDRC), Arak University of Medical Sciences, Arak, Iran.
Rep Biochem Mol Biol. 2021 Jan;9(4):408-416. doi: 10.52547/rbmb.9.4.408.
The -pathway is involved in several cancers, including colorectal cancer (CRC). Many cell signaling components and pathways are controlled by microRNAs. The main purpose of the present study was to investigate the expression of , and its two target genes of the -pathway in CRC clinical samples.
In this study, we predicted the miRNAs targeting key genes of -pathway using bioinformatics algorithms. The expression levels of -374, and on 48 pairs of Formalin-Fixed Paraffin-Embedded (FFPE) CRC tumors and marginal-tumors were evaluated using real time-PCR. Additionally, the precursor sequence was amplified by whole-blood DNA as a template. This amplicon was cloned into pEGFP-c1 expression vector and transfected into SW742 cells. Aside from this, MTT assay was performed to evaluate the effect of on cell viability.
The bioinformatics analysis indicated that -374 binds to the regulatory region the key components of -pathway, including and considering the recognition elements and mirSVR scores. Our results revealed significant down-regulation of (0.94 times, p= 0.0098) and (0.96 times, p= 0.03) and up-regulation of -374 (1.22 times, p= 0.0071) on tumor samples compared with their normal pairs. Meanwhile, the results of the over-expression of miR-374 showed down-regulation of and . MTT-assay also indicated that the increased cell survival.
The results of our study indicated a concomitant change in the expression of and its two related target genes, in clinical samples of CRC. -374 might be as a helpful biomarker or therapeutic target in CRC.
-通路参与包括结直肠癌(CRC)在内的多种癌症。许多细胞信号成分和通路受微小RNA调控。本研究的主要目的是调查-通路的及其两个靶基因在CRC临床样本中的表达情况。
在本研究中,我们使用生物信息学算法预测靶向-通路关键基因的微小RNA。使用实时聚合酶链反应评估48对福尔马林固定石蜡包埋(FFPE)CRC肿瘤组织和癌旁组织中-374、和的表达水平。此外,以前体序列作为模板,通过全血DNA进行扩增。将此扩增子克隆到pEGFP-c1表达载体中,并转染到SW742细胞中。除此之外,进行MTT实验以评估对细胞活力的影响。
生物信息学分析表明,考虑到识别元件和mirSVR评分,-374与-通路关键成分的调控区域结合,包括和。我们的结果显示,与正常组织相比,肿瘤样本中的显著下调(0.94倍,p = 0.0098)和下调(0.96倍,p = 0.03),-374上调(1.22倍,p = 0.0071)。同时,miR-374过表达的结果显示和下调。MTT实验还表明增加了细胞存活率。
我们的研究结果表明,在CRC临床样本中,及其两个相关靶基因的表达同时发生变化。-374可能是CRC中一个有用的生物标志物或治疗靶点。