• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

泰国家禽养殖场、屠宰场和零售摊位沙门氏菌分离株的全基因组测序分析

Whole-Genome Sequencing Analysis of Salmonella Isolates from Poultry Farms, a Slaughterhouse, and Retail Stalls in Thailand.

作者信息

Ong Kar Hui, Aung Kyaw Thu, Chan Sharon C M, Chen Swaine L, Ng Lee Ching, Vongkamjan Kitiya

机构信息

National Centre for Food Science, Singapore Food Agency, Singapore.

Environmental Health Institute, National Environment Agency, Singapore.

出版信息

Microbiol Resour Announc. 2021 May 13;10(19):e01063-20. doi: 10.1128/MRA.01063-20.

DOI:10.1128/MRA.01063-20
PMID:33986103
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8142589/
Abstract

The draft genome sequences of 21 isolates obtained from poultry production chains in Hat Yai City, Songkhla Province, Thailand, are reported in this study. Our study revealed that there was environmental contamination along poultry production chains and cross-contamination among poultry through inanimate surfaces in the environment.

摘要

本研究报告了从泰国宋卡府合艾市家禽生产链中分离出的21株菌株的基因组序列草图。我们的研究表明，家禽生产链存在环境污染，并且家禽之间通过环境中的无生命表面发生了交叉污染。

相似文献

1
Whole-Genome Sequencing Analysis of Salmonella Isolates from Poultry Farms, a Slaughterhouse, and Retail Stalls in Thailand.泰国家禽养殖场、屠宰场和零售摊位沙门氏菌分离株的全基因组测序分析
Microbiol Resour Announc. 2021 May 13;10(19):e01063-20. doi: 10.1128/MRA.01063-20.
2
Rural Health Care Workers and Local Residents Health Status in Yulong County of Yunnan Province China and Hat Yai City of Songkhla Mansion Thailand.中国云南省玉龙县和泰国宋卡府合艾市农村医护人员及当地居民的健康状况
JNMA J Nepal Med Assoc. 2017 Jan-Mar;56(205):168-174.
3
Occurrence, genotypes and antimicrobial susceptibility of Salmonella collected from the broiler production chain within an integrated poultry company.在一家综合性家禽公司内，从肉鸡生产链中采集的沙门氏菌的发生、基因型和抗菌药敏性。
Int J Food Microbiol. 2019 Jun 16;299:1-7. doi: 10.1016/j.ijfoodmicro.2019.03.014. Epub 2019 Mar 24.
4
[Molecular typing of isolates from poultry production chains in four cities of Heilongjiang province].[黑龙江省四个城市家禽生产链分离株的分子分型]
Zhonghua Liu Xing Bing Xue Za Zhi. 2016 Dec 10;37(12):1630-1638. doi: 10.3760/cma.j.issn.0254-6450.2016.12.015.
5
Genome sequence analysis of 91 Salmonella Enteritidis isolates from mice caught on poultry farms in the mid 1990s.20 世纪 90 年代中期从家禽养殖场捕获的老鼠中分离的 91 株肠炎沙门氏菌的基因组序列分析。
Genomics. 2020 Jan;112(1):528-544. doi: 10.1016/j.ygeno.2019.04.005. Epub 2019 Apr 8.
6
A Whole-Genome Sequencing Approach To Study Cefoxitin-Resistant Salmonella enterica Serovar Heidelberg Isolates from Various Sources.一种全基因组测序方法用于研究来自不同来源的对头孢西丁耐药的肠炎沙门氏菌海德堡血清型分离株。
Antimicrob Agents Chemother. 2017 Mar 24;61(4). doi: 10.1128/AAC.01919-16. Print 2017 Apr.
7
Characterization of Flagellotropic, Chi-Like Phages Isolated from Thai Poultry Farms.从泰国家禽养殖场分离的鞭毛嗜性、类似 Chi 的噬菌体的特性研究。
Viruses. 2019 Jun 5;11(6):520. doi: 10.3390/v11060520.
8
Draft genome sequences of two ciprofloxacin-resistant Salmonella enterica subsp. enterica serotype Kentucky ST198 isolated from retail chicken carcasses in Egypt.两株从埃及零售鸡肉中分离的耐环丙沙星肠炎沙门氏菌血清型肯塔基 ST198 的基因组草图序列。
J Glob Antimicrob Resist. 2018 Sep;14:101-103. doi: 10.1016/j.jgar.2018.06.012. Epub 2018 Jun 30.
9
A cross-sectional study of Salmonella in pork products in Chiang Mai, Thailand.泰国清迈猪肉产品中沙门氏菌的横断面研究。
Foodborne Pathog Dis. 2010 Aug;7(8):873-8. doi: 10.1089/fpd.2009.0436.
10
Phenotypic characteristics and genotypic correlation between Salmonella isolates from a slaughterhouse and retail markets in Yangzhou, China.中国扬州某屠宰场和零售市场分离的沙门氏菌菌株的表型特征及基因型相关性
Int J Food Microbiol. 2016 Apr 2;222:56-64. doi: 10.1016/j.ijfoodmicro.2016.01.020. Epub 2016 Jan 29.

引用本文的文献

1
Genomic analysis of isolated from canal water in Bangkok, Thailand.从泰国曼谷运河水中分离的的基因组分析。
Microbiol Spectr. 2024 May 2;12(5):e0421623. doi: 10.1128/spectrum.04216-23. Epub 2024 Apr 2.

本文引用的文献

1
Characterizing Antimicrobial Use in the Livestock Sector in Three South East Asian Countries (Indonesia, Thailand, and Vietnam).东南亚三个国家（印度尼西亚、泰国和越南）畜牧业抗菌药物使用情况的特征分析
Antibiotics (Basel). 2019 Mar 25;8(1):33. doi: 10.3390/antibiotics8010033.
2
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
3
OPERA-LG: efficient and exact scaffolding of large, repeat-rich eukaryotic genomes with performance guarantees.OPERA-LG：对富含重复序列的大型真核基因组进行高效且精确的支架构建，并提供性能保证。
Genome Biol. 2016 May 11;17:102. doi: 10.1186/s13059-016-0951-y.
4
Salmonella serotype determination utilizing high-throughput genome sequencing data.利用高通量基因组测序数据进行沙门氏菌血清型鉴定
J Clin Microbiol. 2015 May;53(5):1685-92. doi: 10.1128/JCM.00323-15. Epub 2015 Mar 11.
5
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.SRST2：用于公共卫生和医院微生物实验室的快速基因组监测。
Genome Med. 2014 Nov 20;6(11):90. doi: 10.1186/s13073-014-0090-6. eCollection 2014.
6
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具（PlasmidFinder）和质粒多位点序列分型进行质粒的电子检测和分型
Antimicrob Agents Chemother. 2014 Jul;58(7):3895-903. doi: 10.1128/AAC.02412-14. Epub 2014 Apr 28.
7
Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
8
ARG-ANNOT, a new bioinformatic tool to discover antibiotic resistance genes in bacterial genomes.ARG-ANNOT，一种新的生物信息学工具，用于发现细菌基因组中的抗生素耐药基因。
Antimicrob Agents Chemother. 2014;58(1):212-20. doi: 10.1128/AAC.01310-13. Epub 2013 Oct 21.
9
BIGSdb: Scalable analysis of bacterial genome variation at the population level.BIGSdb：在群体水平上对细菌基因组变异进行可扩展的分析。
BMC Bioinformatics. 2010 Dec 10;11:595. doi: 10.1186/1471-2105-11-595.
10
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.《天鹅绒：使用德布鲁因图进行从头短读长拼接的算法》
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.