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迷你综述:基于酶的DNA合成及用于数据存储的选择性检索

Mini review: Enzyme-based DNA synthesis and selective retrieval for data storage.

作者信息

Yoo Eojin, Choe Donghui, Shin Jongoh, Cho Suhyung, Cho Byung-Kwan

机构信息

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, Republic of Korea.

Innovative Biomaterials Research Center, KI for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon 34141, Republic of Korea.

出版信息

Comput Struct Biotechnol J. 2021 Apr 25;19:2468-2476. doi: 10.1016/j.csbj.2021.04.057. eCollection 2021.

Abstract

The market for using and storing digital data is growing, with DNA synthesis emerging as an efficient way to store massive amounts of data. Storing information in DNA mainly consists of two steps: data writing and reading. The writing step requires encoding data in DNA, building one nucleotide at a time as a form of single-stranded DNA (ssDNA). Once the data needs to be read, the target DNA is selectively retrieved and sequenced, which will also be in the form of an ssDNA. Recently, enzyme-based DNA synthesis is emerging as a new method to be a breakthrough on behalf of decades-old chemical synthesis. A few enzymatic methods have been presented for data memory, including the use of terminal deoxynucleotidyl transferase. Besides, enzyme-based amplification or denaturation of the target strand into ssDNA provides selective access to the desired dataset. In this review, we summarize diverse enzymatic methods for either synthesizing ssDNA or retrieving the data-containing DNA.

摘要

使用和存储数字数据的市场正在增长,DNA合成作为一种存储大量数据的有效方式正在兴起。将信息存储在DNA中主要包括两个步骤:数据写入和读取。在DNA中写入数据主要包括两个步骤:数据写入和读取。写入步骤需要将数据编码到DNA中,一次构建一个核苷酸,形成单链DNA(ssDNA)的形式。一旦需要读取数据,就会选择性地检索目标DNA并进行测序,其形式也将是ssDNA。最近,基于酶的DNA合成作为一种新方法正在兴起,有望在数十年来的化学合成方法上取得突破。已经提出了一些用于数据存储的酶促方法,包括使用末端脱氧核苷酸转移酶。此外,基于酶的将目标链扩增或变性为ssDNA的方法可提供对所需数据集的选择性访问。在这篇综述中,我们总结了用于合成ssDNA或检索含数据DNA的各种酶促方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d52d/8113751/0260ed3dbca3/gr1.jpg

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