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高通量分析脂滴结合线粒体的图像

High-Throughput Image Analysis of Lipid-Droplet-Bound Mitochondria.

机构信息

Division of Endocrinology, Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.

Department of Medicine, Obesity Research Center, Boston University School of Medicine, Boston, MA, USA.

出版信息

Methods Mol Biol. 2021;2276:285-303. doi: 10.1007/978-1-0716-1266-8_22.

Abstract

Changes to mitochondrial architecture are associated with various adaptive and pathogenic processes. However, quantification of changes to mitochondrial structures is limited by the yet unmet challenge of defining the borders of each individual mitochondrion within an image. Here, we describe a novel method for segmenting primary brown adipocyte (BA) mitochondria images. We describe a granular approach to quantifying subcellular structures, particularly mitochondria in close proximity to lipid droplets: peridroplet mitochondria. In addition, we lay out a novel machine-learning-based mitochondrial segmentation method that eliminates the bias of manual mitochondrial segmentation and improves object recognition compared to conventional thresholding analyses. By applying these methods, we discovered a significant difference between cytosolic and peridroplet BA mitochondrial HO production and validated the machine-learning algorithm in BA via norepinephrine-induced mitochondrial fragmentation and comparing manual analyses to the automated analysis. This approach provides a high-throughput analysis protocol to quantify ratiometric probes in subpopulations of mitochondria in adipocytes.

摘要

线粒体结构的变化与各种适应性和致病过程有关。然而,由于尚未解决在图像内定义每个单个线粒体边界的挑战,因此对线粒体结构变化的定量仍然受到限制。在这里,我们描述了一种用于分割原代棕色脂肪细胞(BA)线粒体图像的新方法。我们描述了一种用于量化亚细胞结构的粒度方法,特别是与脂质滴紧密接近的线粒体:滴周线粒体。此外,我们提出了一种新的基于机器学习的线粒体分割方法,该方法消除了手动线粒体分割的偏差,并与传统的阈值分析相比提高了对象识别能力。通过应用这些方法,我们发现胞质和滴周 BA 线粒体 HO 产生之间存在显著差异,并通过去甲肾上腺素诱导的线粒体碎片化和将手动分析与自动分析进行比较,在 BA 中验证了机器学习算法。这种方法提供了一种高通量分析方案,用于定量脂肪细胞中亚群线粒体的比率探针。

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