O'Brien Hugh, Whitaker John, Singh Sidhu Baldeep, Gould Justin, Kurzendorfer Tanja, O'Neill Mark D, Rajani Ronak, Grigoryan Karine, Rinaldi Christopher Aldo, Taylor Jonathan, Rhode Kawal, Mountney Peter, Niederer Steven
School of Biomedical Engineering and Imaging Sciences, King's College London, London, United Kingdom.
Department of Cardiology, Guy's and St Thomas NHS Foundation Trust, London, United Kingdom.
Front Cardiovasc Med. 2021 Jul 2;8:655252. doi: 10.3389/fcvm.2021.655252. eCollection 2021.
The aim of this study is to develop a scar detection method for routine computed tomography angiography (CTA) imaging using deep convolutional neural networks (CNN), which relies solely on anatomical information as input and is compatible with existing clinical workflows. Identifying cardiac patients with scar tissue is important for assisting diagnosis and guiding interventions. Late gadolinium enhancement (LGE) magnetic resonance imaging (MRI) is the gold standard for scar imaging; however, there are common instances where it is contraindicated. CTA is an alternative imaging modality that has fewer contraindications and is faster than Cardiovascular magnetic resonance imaging but is unable to reliably image scar. A dataset of LGE MRI (200 patients, 83 with scar) was used to train and validate a CNN to detect ischemic scar slices using segmentation masks as input to the network. MRIs were segmented to produce 3D left ventricle meshes, which were sampled at points along the short axis to extract anatomical masks, with scar labels from LGE as ground truth. The trained CNN was tested with an independent CTA dataset (25 patients, with ground truth established with paired LGE MRI). Automated segmentation was performed to provide the same input format of anatomical masks for the network. The CNN was compared against manual reading of the CTA dataset by 3 experts. Note that 84.7% cross-validated accuracy (AUC: 0.896) for detecting scar slices in the left ventricle on the MRI data was achieved. The trained network was tested against the CTA-derived data, with no further training, where it achieved an 88.3% accuracy (AUC: 0.901). The automated pipeline outperformed the manual reading by clinicians. Automatic ischemic scar detection can be performed from a routine cardiac CTA, without any scar-specific imaging or contrast agents. This requires only a single acquisition in the cardiac cycle. In a clinical setting, with near zero additional cost, scar presence could be detected to triage images, reduce reading times, and guide clinical decision-making.
本研究的目的是开发一种用于常规计算机断层血管造影(CTA)成像的瘢痕检测方法,该方法使用深度卷积神经网络(CNN),仅依赖解剖学信息作为输入,并与现有的临床工作流程兼容。识别有瘢痕组织的心脏病患者对于辅助诊断和指导干预措施很重要。延迟钆增强(LGE)磁共振成像(MRI)是瘢痕成像的金标准;然而,在很多常见情况下它是禁忌的。CTA是一种替代成像方式,其禁忌证较少,且比心血管磁共振成像更快,但无法可靠地对瘢痕进行成像。使用LGE MRI数据集(200例患者,83例有瘢痕)来训练和验证一个CNN,以分割掩码作为网络输入来检测缺血性瘢痕切片。对MRI进行分割以生成三维左心室网格,在短轴上的点进行采样以提取解剖掩码,并将来自LGE的瘢痕标签作为真实数据。使用独立的CTA数据集(25例患者,通过配对的LGE MRI确定真实数据)对训练好的CNN进行测试。进行自动分割以提供与网络相同输入格式的解剖掩码。将该CNN与3位专家对CTA数据集的人工解读进行比较。注意,在MRI数据上检测左心室瘢痕切片的交叉验证准确率达到了84.7%(AUC:0.896)。在未进行进一步训练的情况下,使用来自CTA的数据对训练好的网络进行测试,其准确率达到了88.3%(AUC:0.901)。自动流程的表现优于临床医生的人工解读。无需任何特定于瘢痕的成像或造影剂,即可从常规心脏CTA中进行自动缺血性瘢痕检测。这在心动周期中仅需一次采集。在临床环境中,几乎无需额外成本,就可以检测瘢痕的存在,以对图像进行分类、减少阅读时间并指导临床决策。