• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

体素跳跃:基于结构 MRI 的 ALS 疾病分类的连续子空间学习。

VoxelHop: Successive Subspace Learning for ALS Disease Classification Using Structural MRI.

出版信息

IEEE J Biomed Health Inform. 2022 Mar;26(3):1128-1139. doi: 10.1109/JBHI.2021.3097735. Epub 2022 Mar 7.

DOI:10.1109/JBHI.2021.3097735
PMID:34339378
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8807766/
Abstract

Deep learning has great potential for accurate detection and classification of diseases with medical imaging data, but the performance is often limited by the number of training datasets and memory requirements. In addition, many deep learning models are considered a "black-box," thereby often limiting their adoption in clinical applications. To address this, we present a successive subspace learning model, termed VoxelHop, for accurate classification of Amyotrophic Lateral Sclerosis (ALS) using T2-weighted structural MRI data. Compared with popular convolutional neural network (CNN) architectures, VoxelHop has modular and transparent structures with fewer parameters without any backpropagation, so it is well-suited to small dataset size and 3D imaging data. Our VoxelHop has four key components, including (1) sequential expansion of near-to-far neighborhood for multi-channel 3D data; (2) subspace approximation for unsupervised dimension reduction; (3) label-assisted regression for supervised dimension reduction; and (4) concatenation of features and classification between controls and patients. Our experimental results demonstrate that our framework using a total of 20 controls and 26 patients achieves an accuracy of 93.48 % and an AUC score of 0.9394 in differentiating patients from controls, even with a relatively small number of datasets, showing its robustness and effectiveness. Our thorough evaluations also show its validity and superiority to the state-of-the-art 3D CNN classification approaches. Our framework can easily be generalized to other classification tasks using different imaging modalities.

摘要

深度学习在利用医学成像数据进行疾病的准确检测和分类方面具有巨大的潜力,但性能往往受到训练数据集数量和内存需求的限制。此外,许多深度学习模型被认为是一个“黑箱”,因此在临床应用中往往受到限制。为了解决这个问题,我们提出了一种连续子空间学习模型,称为 VoxelHop,用于使用 T2 加权结构 MRI 数据对肌萎缩侧索硬化症 (ALS)进行准确分类。与流行的卷积神经网络 (CNN) 架构相比,VoxelHop 具有模块化和透明的结构,参数较少,无需反向传播,因此非常适合小数据集大小和 3D 成像数据。我们的 VoxelHop 有四个关键组件,包括 (1) 多通道 3D 数据的近到远邻的顺序扩展;(2) 无监督降维的子空间逼近;(3) 有监督降维的标签辅助回归;以及 (4) 控制和患者之间的特征和分类的连接。我们的实验结果表明,我们的框架使用总共 20 个对照和 26 个患者,在区分患者和对照方面达到了 93.48%的准确率和 0.9394 的 AUC 评分,即使数据集数量相对较少,也显示出其稳健性和有效性。我们的全面评估还表明,它比最先进的 3D CNN 分类方法具有有效性和优越性。我们的框架可以很容易地推广到使用不同成像模式的其他分类任务。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/8e3b43f4baa1/nihms-1735875-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/993c5637fa4b/nihms-1735875-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/6a4368bc52a7/nihms-1735875-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/8e01a6ce9bb1/nihms-1735875-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/795f0b6d0e6f/nihms-1735875-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/fa8ae11268a9/nihms-1735875-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/cf6a6fc45cb6/nihms-1735875-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/066d89bdfca3/nihms-1735875-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/564db74f8408/nihms-1735875-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/4ed3c50ad418/nihms-1735875-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/8e3b43f4baa1/nihms-1735875-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/993c5637fa4b/nihms-1735875-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/6a4368bc52a7/nihms-1735875-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/8e01a6ce9bb1/nihms-1735875-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/795f0b6d0e6f/nihms-1735875-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/fa8ae11268a9/nihms-1735875-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/cf6a6fc45cb6/nihms-1735875-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/066d89bdfca3/nihms-1735875-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/564db74f8408/nihms-1735875-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/4ed3c50ad418/nihms-1735875-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/587e/8807766/8e3b43f4baa1/nihms-1735875-f0010.jpg

相似文献

1
VoxelHop: Successive Subspace Learning for ALS Disease Classification Using Structural MRI.体素跳跃:基于结构 MRI 的 ALS 疾病分类的连续子空间学习。
IEEE J Biomed Health Inform. 2022 Mar;26(3):1128-1139. doi: 10.1109/JBHI.2021.3097735. Epub 2022 Mar 7.
2
Segmentation of Cardiac Structures via Successive Subspace Learning with Saab Transform from Cine MRI.基于 Saab 变换的连续子空间学习对 Cine MRI 中的心脏结构进行分割。
Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:3535-3538. doi: 10.1109/EMBC46164.2021.9629770.
3
SF2Former: Amyotrophic lateral sclerosis identification from multi-center MRI data using spatial and frequency fusion transformer.SF2Former:使用空间和频率融合变压器从多中心 MRI 数据中识别肌萎缩性侧索硬化症。
Comput Med Imaging Graph. 2023 Sep;108:102279. doi: 10.1016/j.compmedimag.2023.102279. Epub 2023 Jul 29.
4
SUCCESSIVE SUBSPACE LEARNING FOR CARDIAC DISEASE CLASSIFICATION WITH TWO-PHASE DEFORMATION FIELDS FROM CINE MRI.基于心脏磁共振电影成像的两相形变场,采用连续子空间学习进行心脏病分类
Proc IEEE Int Symp Biomed Imaging. 2023 Apr;2023. doi: 10.1109/isbi53787.2023.10230746. Epub 2023 Sep 1.
5
Deep Multi-Scale 3D Convolutional Neural Network (CNN) for MRI Gliomas Brain Tumor Classification.基于深度多尺度 3D 卷积神经网络(CNN)的 MRI 脑肿瘤胶质瘤分类。
J Digit Imaging. 2020 Aug;33(4):903-915. doi: 10.1007/s10278-020-00347-9.
6
A multi-model deep convolutional neural network for automatic hippocampus segmentation and classification in Alzheimer's disease.一种用于阿尔茨海默病中海马自动分割和分类的多模态深度卷积神经网络。
Neuroimage. 2020 Mar;208:116459. doi: 10.1016/j.neuroimage.2019.116459. Epub 2019 Dec 16.
7
A computational framework for the detection of subcortical brain dysmaturation in neonatal MRI using 3D Convolutional Neural Networks.使用 3D 卷积神经网络在新生儿 MRI 中检测皮质下脑发育不良的计算框架。
Neuroimage. 2018 Sep;178:183-197. doi: 10.1016/j.neuroimage.2018.05.049. Epub 2018 May 21.
8
Convolutional neural networks for classification of Alzheimer's disease: Overview and reproducible evaluation.卷积神经网络在阿尔茨海默病分类中的应用:综述与可重现性评估。
Med Image Anal. 2020 Jul;63:101694. doi: 10.1016/j.media.2020.101694. Epub 2020 May 1.
9
A parameter-efficient deep learning approach to predict conversion from mild cognitive impairment to Alzheimer's disease.一种参数高效的深度学习方法,用于预测轻度认知障碍向阿尔茨海默病的转化。
Neuroimage. 2019 Apr 1;189:276-287. doi: 10.1016/j.neuroimage.2019.01.031. Epub 2019 Jan 14.
10
Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning.用于计算机辅助检测的深度卷积神经网络:卷积神经网络架构、数据集特征与迁移学习
IEEE Trans Med Imaging. 2016 May;35(5):1285-98. doi: 10.1109/TMI.2016.2528162. Epub 2016 Feb 11.

引用本文的文献

1
BERTHop: An Effective Vision-and-Language Model for Chest X-ray Disease Diagnosis.BERTHop:一种用于胸部X光疾病诊断的有效视觉语言模型。
Med Image Comput Comput Assist Interv. 2022 Sep;13435:725-734. doi: 10.1007/978-3-031-16443-9_69. Epub 2022 Sep 16.

本文引用的文献

1
On Interpretability of Artificial Neural Networks: A Survey.人工神经网络的可解释性:一项综述。
IEEE Trans Radiat Plasma Med Sci. 2021 Nov;5(6):741-760. doi: 10.1109/trpms.2021.3066428. Epub 2021 Mar 17.
2
Accurate brain age prediction with lightweight deep neural networks.使用轻量级深度神经网络进行准确的脑龄预测。
Med Image Anal. 2021 Feb;68:101871. doi: 10.1016/j.media.2020.101871. Epub 2020 Oct 19.
3
3D Deep Learning on Medical Images: A Review.三维深度学习在医学图像中的应用:综述。
Sensors (Basel). 2020 Sep 7;20(18):5097. doi: 10.3390/s20185097.
4
Upper motor neuron burden measurement in motor neuron diseases: Does one scale fit all?运动神经元疾病中上运动神经元负荷测量:一种量表适用于所有人吗?
Muscle Nerve. 2020 Apr;61(4):431-432. doi: 10.1002/mus.26836.
5
Longitudinal multi-modal muscle-based biomarker assessment in motor neuron disease.运动神经元病中基于肌肉的纵向多模态生物标志物评估。
J Neurol. 2020 Jan;267(1):244-256. doi: 10.1007/s00415-019-09580-x. Epub 2019 Oct 17.
6
Imaging in amyotrophic lateral sclerosis: MRI and PET.肌萎缩侧索硬化症的影像学:MRI 和 PET。
Curr Opin Neurol. 2019 Oct;32(5):740-746. doi: 10.1097/WCO.0000000000000728.
7
Differentiating post-cancer from healthy tongue muscle coordination patterns during speech using deep learning.利用深度学习区分癌症后和健康人舌肌在言语时的协调模式。
J Acoust Soc Am. 2019 May;145(5):EL423. doi: 10.1121/1.5103191.
8
Machine Learning in Amyotrophic Lateral Sclerosis: Achievements, Pitfalls, and Future Directions.肌萎缩侧索硬化症中的机器学习:成就、陷阱与未来方向。
Front Neurosci. 2019 Feb 28;13:135. doi: 10.3389/fnins.2019.00135. eCollection 2019.
9
Multi-Channel 3D Deep Feature Learning for Survival Time Prediction of Brain Tumor Patients Using Multi-Modal Neuroimages.基于多模态神经影像的多通道 3D 深度特征学习在脑肿瘤患者生存时间预测中的应用。
Sci Rep. 2019 Jan 31;9(1):1103. doi: 10.1038/s41598-018-37387-9.
10
Magnetic resonance imaging based anatomical assessment of tongue impairment due to amyotrophic lateral sclerosis: A preliminary study.基于磁共振成像的肌萎缩侧索硬化所致舌部运动障碍的解剖学评估:一项初步研究。
J Acoust Soc Am. 2018 Apr;143(4):EL248. doi: 10.1121/1.5030134.