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新种及新种,从中国海水养殖鱼塘中分离得到。

sp. nov. and sp. nov., isolated from mariculture fishponds in China.

机构信息

College of Life Sciences, South China Agricultural University, Guangzhou 510642, PR China.

Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Academy of Sciences, Guangzhou 510070, PR China.

出版信息

Int J Syst Evol Microbiol. 2021 Aug;71(8). doi: 10.1099/ijsem.0.004941.

Abstract

Four Gram-stain-negative, catalase- and oxidase-positive, rod-shaped and motile strains (Y26, Y57, ZJ14W and RP18W) were isolated from mariculture fishponds in PR China. Comparisons based on 16S rRNA gene sequences showed that strains Y26 and Y57 share 16S rRNA gene sequence similarities in the range of 95.1-98.5 % with species of the genus , and strains ZJ14W and RP18W share 16S rRNA gene sequence similarities in the range of 96.7 -98.8 % with species of the genus , respectively. The genome sizes of strains Y26, Y57, ZJ14W and RP18W were about 4.85, 5.40, 4.70 and 4.70 Mbp with 49.5, 51.7, 51.2 and 51.3 mol% G+C content, respectively. The calculated pairwise OrthoANIu values among strains Y26, Y57 and species of the genus were in the range of 72.6-83.1 %, but the value between strains Y26 and Y57 was 96.2 %. The pairwise OrthoANIu values among strains ZJ14W, RP18W and other species of the genus were all less than 93.9 %, but the value between strains ZJ14W and RP18W was 99.3 %. Q-8 was the major respiratory quinone of strains Y26, Y57, ZJ14W and RP18W, and the major fatty acids of these strains were all C ω7, C and C ω7. The predominant polar lipids of strains Y26 and Y57 included phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and phosphatidylinositol, but strains ZJ14W and RP18W only contained phosphatidylethanolamine and phosphatidylglycerol. Combining phenotypic, biochemical and genotypic characteristics, strains Y26 and Y57 should belong to the same species and represent a novel member of the genus , and strains ZJ14W and RP18W should belong to the same species and represent a novel member of the genus , for which the names sp. nov. (type strain Y57=GDMCC 1.2180=KCTC 82439) and sp. nov. (type strain ZJ14W=GDMCC 1.2203=KCTC 82438) are proposed.

摘要

四株革兰氏阴性、过氧化氢酶和氧化酶阳性、杆状、运动的菌株(Y26、Y57、ZJ14W 和 RP18W)从中国水产养殖鱼池中分离出来。基于 16S rRNA 基因序列的比较表明,菌株 Y26 和 Y57 与属内的种的 16S rRNA 基因序列相似性在 95.1-98.5%范围内,而菌株 ZJ14W 和 RP18W 与属内的种的 16S rRNA 基因序列相似性在 96.7-98.8%范围内。菌株 Y26、Y57、ZJ14W 和 RP18W 的基因组大小约为 4.85、5.40、4.70 和 4.70 Mbp,GC 含量分别为 49.5、51.7、51.2 和 51.3 mol%。菌株 Y26、Y57 和属内种之间的计算的两两 OrthoANIu 值在 72.6-83.1%范围内,但菌株 Y26 和 Y57 之间的比值为 96.2%。菌株 ZJ14W、RP18W 和属内其他种之间的两两 OrthoANIu 值均小于 93.9%,但菌株 ZJ14W 和 RP18W 之间的比值为 99.3%。Q-8 是菌株 Y26、Y57、ZJ14W 和 RP18W 的主要呼吸醌,这些菌株的主要脂肪酸均为 C ω7、C 和 C ω7。菌株 Y26 和 Y57 的主要极性脂包括磷脂酰乙醇胺、磷脂酰甘油、双磷脂酰甘油和磷脂酰肌醇,但菌株 ZJ14W 和 RP18W 仅含有磷脂酰乙醇胺和磷脂酰甘油。结合表型、生化和基因型特征,菌株 Y26 和 Y57 应属于同一物种,代表属内的一个新成员,而菌株 ZJ14W 和 RP18W 应属于同一物种,代表属内的一个新成员,因此分别命名为. sp. nov.(模式菌株 Y57=GDMCC 1.2180=KCTC 82439)和. sp. nov.(模式菌株 ZJ14W=GDMCC 1.2203=KCTC 82438)。

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