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基于时间注意力机制的自动睡眠分期算法

Automatic Sleep Staging Algorithm Based on Time Attention Mechanism.

作者信息

Feng Li-Xiao, Li Xin, Wang Hong-Yu, Zheng Wen-Yin, Zhang Yong-Qing, Gao Dong-Rui, Wang Man-Qing

机构信息

Department of Computer Science, Chengdu University of Information Technology, Chengdu, China.

Department of Biological Engineering, University of Electronic Science and Technology of China, Chengdu, China.

出版信息

Front Hum Neurosci. 2021 Aug 17;15:692054. doi: 10.3389/fnhum.2021.692054. eCollection 2021.

Abstract

The most important part of sleep quality assessment is the automatic classification of sleep stages. Sleep staging is helpful in the diagnosis of sleep-related diseases. This study proposes an automatic sleep staging algorithm based on the time attention mechanism. Time-frequency and non-linear features are extracted from the physiological signals of six channels and then normalized. The time attention mechanism combined with the two-way bi-directional gated recurrent unit (GRU) was used to reduce computing resources and time costs, and the conditional random field (CRF) was used to obtain information between tags. After five-fold cross-validation on the Sleep-EDF dataset, the values of accuracy, WF1, and Kappa were 0.9218, 0.9177, and 0.8751, respectively. After five-fold cross-validation on the our own dataset, the values of accuracy, WF1, and Kappa were 0.9006, 0.8991, and 0.8664, respectively, which is better than the result of the latest algorithm. In the study of sleep staging, the recognition rate of the N1 stage was low, and the imbalance has always been a problem. Therefore, this study introduces a type of balancing strategy. By adopting the proposed strategy, SEN-N1 and ACC of 0.7 and 0.86, respectively, can be achieved. The experimental results show that compared to the latest method, the proposed model can achieve significantly better performance and significantly improve the recognition rate of the N1 period. The performance comparison of different channels shows that even when the EEG channel was not used, considerable accuracy can be obtained.

摘要

睡眠质量评估最重要的部分是睡眠阶段的自动分类。睡眠分期有助于睡眠相关疾病的诊断。本研究提出了一种基于时间注意力机制的自动睡眠分期算法。从六个通道的生理信号中提取时频和非线性特征,然后进行归一化处理。将时间注意力机制与双向门控循环单元(GRU)相结合,以减少计算资源和时间成本,并使用条件随机场(CRF)来获取标签之间的信息。在Sleep-EDF数据集上进行五折交叉验证后,准确率、WF1和Kappa值分别为0.9218、0.9177和0.8751。在我们自己的数据集上进行五折交叉验证后,准确率、WF1和Kappa值分别为0.9006、0.8991和0.8664,优于最新算法的结果。在睡眠分期研究中,N1期的识别率较低,不平衡一直是个问题。因此,本研究引入了一种平衡策略。通过采用所提出的策略,SEN-N1和ACC分别可以达到0.7和0.86。实验结果表明,与最新方法相比,所提出的模型可以实现显著更好的性能,并显著提高N1期的识别率。不同通道的性能比较表明,即使不使用脑电图通道,也可以获得相当高的准确率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4919/8416031/e6a6d5330650/fnhum-15-692054-g0001.jpg

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