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印度南部沿海水域中,早期生物膜的细菌群落结构由时间演替决定,而不是由基质类型决定。

Bacterial community structure of early-stage biofilms is dictated by temporal succession rather than substrate types in the southern coastal seawater of India.

机构信息

Department of Biotechnology, Alagappa University, Karaikudi, Tamil Nadu, India.

Water and Steam Chemistry Division, Bhabha Atomic Research Centre Facilities, Kalpakkam, Tamil Nadu, India.

出版信息

PLoS One. 2021 Sep 27;16(9):e0257961. doi: 10.1371/journal.pone.0257961. eCollection 2021.

Abstract

Bacterial communities colonized on submerged substrata are recognized as a key factor in the formation of complex biofouling phenomenon in the marine environment. Despite massive maritime activities and a large industrial sector in the nearshore of the Laccadive Sea, studies describing pioneer bacterial colonizers and community succession during the early-stage biofilm are scarce. We investigated the biofilm-forming bacterial community succession on three substrata viz. stainless steel, high-density polyethylene, and titanium over 15 days of immersion in the seawater intake area of a power plant, located in the southern coastal region of India. The bacterial community composition of biofilms and peripheral seawater were analyzed by Illumina MiSeq sequenced 16S rRNA gene amplicons. The obtained metataxonomic results indicated a profound influence of temporal succession over substrate type on the early-stage biofilm-forming microbiota. Bacterial communities showed vivid temporal dynamics that involved variations in abundant bacterial groups. The proportion of dominant phyla viz. Proteobacteria decreased over biofilm succession days, while Bacteroidetes increased, suggesting their role as initial and late colonizers, respectively. A rapid fluctuation in the proportion of two bacterial orders viz. Alteromonadales and Vibrionales were observed throughout the successional stages. LEfSe analysis identified specific bacterial groups at all stages of biofilm development, whereas no substrata type-specific groups were observed. Furthermore, the results of PCoA and UPGMA hierarchical clustering demonstrated that the biofilm-forming community varied considerably from the planktonic community. Phylum Proteobacteria preponderated the biofilm-forming community, while the Bacteroidetes, Cyanobacteria, and Actinobacteria dominated the planktonic community. Overall, our results refute the common assumption that substrate material has a decisive impact on biofilm formation; rather, it portrayed that the temporal succession overshadowed the influence of the substrate material. Our findings provide a scientific understanding of the factors shaping initial biofilm development in the marine environment and will help in designing efficient site-specific anti-biofouling strategies.

摘要

在海洋环境中,附着在水下基质上的细菌群落被认为是形成复杂生物污垢现象的关键因素。尽管在拉克代夫海的近岸地区有大规模的海上活动和庞大的工业部门,但描述早期生物膜中先锋细菌定植者和群落演替的研究仍然很少。我们研究了在印度南部沿海地区的一个发电厂的海水入口区域,三种基质(不锈钢、高密度聚乙烯和钛)上的生物膜形成细菌群落演替,这三种基质的生物膜在 15 天的浸泡过程中。通过 Illumina MiSeq 测序 16S rRNA 基因扩增子分析了生物膜和周边海水中的细菌群落组成。获得的分类学结果表明,时间演替对基质类型对早期生物膜形成微生物群的影响很大。细菌群落表现出明显的时间动态,涉及丰富细菌群的变化。优势门的比例发生了变化,例如随着生物膜演替天数的增加,变形菌门的比例减少,而拟杆菌门的比例增加,这表明它们分别作为初始和晚期定植者的作用。在整个演替阶段,两个细菌目(交替单胞菌目和颤蚓目)的比例迅速波动。LEfSe 分析确定了生物膜发育各个阶段的特定细菌群,而没有观察到基质类型特异性群。此外,PCoA 和 UPGMA 层次聚类的结果表明,生物膜形成群落与浮游群落有很大差异。变形菌门在生物膜形成群落中占优势,而拟杆菌门、蓝细菌门和放线菌门在浮游群落中占优势。总的来说,我们的结果反驳了基质材料对生物膜形成有决定性影响的常见假设;相反,它表明时间演替掩盖了基质材料的影响。我们的研究结果提供了对塑造海洋环境中初始生物膜形成的因素的科学理解,并将有助于设计针对特定地点的高效抗生物污损策略。

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