Volk Gayle M, Byrne Patrick F, Coyne Clarice J, Flint-Garcia Sherry, Reeves Patrick A, Richards Chris
United States Department of Agriculture, Agricultural Research Service, National Laboratory for Genetic Resources Preservation, Fort Collins, CO 80521, USA.
Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523, USA.
Plants (Basel). 2021 Oct 22;10(11):2260. doi: 10.3390/plants10112260.
Plant genebanks provide genetic resources for breeding and research programs worldwide. These programs benefit from having access to high-quality, standardized phenotypic and genotypic data. Technological advances have made it possible to collect phenomic and genomic data for genebank collections, which, with the appropriate analytical tools, can directly inform breeding programs. We discuss the importance of considering genebank accession homogeneity and heterogeneity in data collection and documentation. Citing specific examples, we describe how well-documented genomic and phenomic data have met or could meet the needs of plant genetic resource managers and users. We explore future opportunities that may emerge from improved documentation and data integration among plant genetic resource information systems.
植物基因库为全球的育种和研究项目提供遗传资源。这些项目受益于能够获取高质量、标准化的表型和基因型数据。技术进步使得为基因库收集的材料收集表型组学和基因组学数据成为可能,借助适当的分析工具,这些数据能够直接为育种项目提供信息。我们讨论了在数据收集和记录中考虑基因库种质的同质性和异质性的重要性。通过引用具体例子,我们描述了记录良好的基因组和表型组学数据如何已经满足或能够满足植物遗传资源管理者和使用者的需求。我们探讨了植物遗传资源信息系统之间改进记录和数据整合可能带来的未来机遇。