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巴伦支海沉积物中参与甲烷、硫和氮循环的微生物群落

Microbial Communities Involved in Methane, Sulfur, and Nitrogen Cycling in the Sediments of the Barents Sea.

作者信息

Begmatov Shahjahon, Savvichev Alexander S, Kadnikov Vitaly V, Beletsky Alexey V, Rusanov Igor I, Klyuvitkin Alexey A, Novichkova Ekaterina A, Mardanov Andrey V, Pimenov Nikolai V, Ravin Nikolai V

机构信息

Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia.

Winogradsky Institute of Microbiology, Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia.

出版信息

Microorganisms. 2021 Nov 15;9(11):2362. doi: 10.3390/microorganisms9112362.

Abstract

A combination of physicochemical and radiotracer analysis, high-throughput sequencing of the 16S rRNA, and particulate methane monooxygenase subunit A () genes was used to link a microbial community profile with methane, sulfur, and nitrogen cycling processes. The objects of study were surface sediments sampled at five stations in the northern part of the Barents Sea. The methane content in the upper layers (0-5 cm) ranged from 0.2 to 2.4 µM and increased with depth (16-19 cm) to 9.5 µM. The rate of methane oxidation in the oxic upper layers varied from 2 to 23 nmol CH L day and decreased to 0.3 nmol L day in the anoxic zone at a depth of 16-19 cm. Sulfate reduction rates were much higher, from 0.3 to 2.8 µmol L day. In the surface sediments, ammonia-oxidizing were abundant; the subsequent oxidation of nitrite to nitrate can be carried out by sp. Aerobic methane oxidation could be performed by uncultured deep-sea cluster 3 of gamma-proteobacterial methanotrophs. Undetectable low levels of methanogenesis were consistent with a near complete absence of methanogens. Anaerobic methane oxidation in the deeper sediments was likely performed by ANME-2a-2b and ANME-2c archaea in consortium with sulfate-reducing . Sulfide can be oxidized by nitrate-reducing sp. Thus, the sulfur cycle was linked with the anaerobic oxidation of methane and the nitrogen cycle, which included the oxidation of ammonium to nitrate in the oxic zone and denitrification coupled to the oxidation of sulfide in the deeper sediments. Methane concentrations and rates of microbial biogeochemical processes in sediments in the northern part of the Barents Sea were noticeably higher than in oligotrophic areas of the Arctic Ocean, indicating that an increase in methane concentration significantly activates microbial processes.

摘要

结合物理化学和放射性示踪分析、16S rRNA高通量测序以及颗粒甲烷单加氧酶亚基A()基因,将微生物群落概况与甲烷、硫和氮循环过程联系起来。研究对象是在巴伦支海北部五个站点采集的表层沉积物。上层(0 - 5厘米)的甲烷含量在0.2至2.4微摩尔之间,并随深度(16 - 19厘米)增加至9.5微摩尔。有氧上层的甲烷氧化速率在2至23纳摩尔CH L天之间变化,在16 - 19厘米深度的缺氧区降至0.3纳摩尔L天。硫酸盐还原速率要高得多,为0.3至2.8微摩尔L天。在表层沉积物中,氨氧化菌大量存在;亚硝酸盐随后氧化为硝酸盐可由 菌属进行。需氧甲烷氧化可由未培养的γ-变形菌甲烷营养菌深海簇3进行。检测不到的低水平产甲烷与几乎完全不存在产甲烷菌一致。较深沉积物中的厌氧甲烷氧化可能由ANME - 2a - 2b和ANME - 2c古菌与硫酸盐还原菌共同进行。硫化物可由硝酸盐还原菌 菌属氧化。因此,硫循环与甲烷厌氧氧化和氮循环相关联,氮循环包括有氧区铵氧化为硝酸盐以及较深沉积物中与硫化物氧化耦合的反硝化作用。巴伦支海北部沉积物中的甲烷浓度和微生物生物地球化学过程速率明显高于北冰洋的贫营养区域,表明甲烷浓度的增加显著激活了微生物过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc57/8625253/24629faa7a96/microorganisms-09-02362-g001.jpg

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