Ravishankar Srinivas, Toneva Mariya, Wehbe Leila
IBM-Research, Yorktown Heights, NY, United States.
Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA, United States.
Front Comput Neurosci. 2021 Nov 11;15:737324. doi: 10.3389/fncom.2021.737324. eCollection 2021.
A pervasive challenge in brain imaging is the presence of noise that hinders investigation of underlying neural processes, with Magnetoencephalography (MEG) in particular having very low Signal-to-Noise Ratio (SNR). The established strategy to increase MEG's SNR involves averaging multiple repetitions of data corresponding to the same stimulus. However, repetition of stimulus can be undesirable, because underlying neural activity has been shown to change across trials, and repeating stimuli limits the breadth of the stimulus space experienced by subjects. In particular, the rising popularity of naturalistic studies with a single viewing of a movie or story necessitates the discovery of new approaches to increase SNR. We introduce a simple framework to reduce noise in single-trial MEG data by leveraging correlations in neural responses across subjects as they experience the same stimulus. We demonstrate its use in a naturalistic reading comprehension task with 8 subjects, with MEG data collected while they read the same story a single time. We find that our procedure results in data with reduced noise and allows for better discovery of neural phenomena. As proof-of-concept, we show that the N400m's correlation with word surprisal, an established finding in literature, is far more clearly observed in the denoised data than the original data. The denoised data also shows higher decoding and encoding accuracy than the original data, indicating that the neural signals associated with reading are either preserved or enhanced after the denoising procedure.
脑成像中一个普遍存在的挑战是噪声的存在,它阻碍了对潜在神经过程的研究,尤其是脑磁图(MEG)的信噪比(SNR)非常低。提高MEG信噪比的既定策略包括对与同一刺激相对应的数据进行多次重复平均。然而,刺激的重复可能并不理想,因为已表明潜在的神经活动会在不同试验中发生变化,并且重复刺激会限制受试者所经历的刺激空间的广度。特别是,单次观看电影或故事的自然主义研究越来越受欢迎,这就需要发现新的方法来提高信噪比。我们引入了一个简单的框架,通过利用受试者在经历相同刺激时神经反应中的相关性来减少单次试验MEG数据中的噪声。我们展示了它在一项有8名受试者的自然主义阅读理解任务中的应用,在他们单次阅读同一个故事时收集MEG数据。我们发现我们的方法能得到噪声减少的数据,并能更好地发现神经现象。作为概念验证,我们表明,在去噪数据中比原始数据更能清楚地观察到N400m与单词意外性的相关性,这是文献中的一个既定发现。去噪数据还显示出比原始数据更高的解码和编码准确性,这表明与阅读相关的神经信号在去噪过程后要么得以保留,要么得到增强。