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提高重复性以满足细胞外囊泡研究的最小信息 2018 年纳米颗粒跟踪分析指南。

Improving Reproducibility to Meet Minimal Information for Studies of Extracellular Vesicles 2018 Guidelines in Nanoparticle Tracking Analysis.

机构信息

Department of Anatomy and Physiology, Kansas State University College of Veterinary Medicine;

Department of Molecular and Integrative Physiology, University of Kansas Medical Center.

出版信息

J Vis Exp. 2021 Nov 17(177). doi: 10.3791/63059.

Abstract

Nanoparticle tracking analysis (NTA) has been one of several characterization methods used for extracellular vesicle (EV) research since 2006. Many consider that NTA instruments and their software packages can be easily utilized following minimal training and that size calibration is feasible in-house. As both NTA acquisition and software analysis constitute EV characterization, they are addressed in Minimal Information for Studies of Extracellular Vesicles 2018 (MISEV2018). In addition, they have been monitored by Transparent Reporting and Centralizing Knowledge in Extracellular Vesicle Research (EV-TRACK) to improve the robustness of EV experiments (e.g., minimize experimental variation due to uncontrolled factors). Despite efforts to encourage the reporting of methods and controls, many published research papers fail to report critical settings needed to reproduce the original NTA observations. Few papers report the NTA characterization of negative controls or diluents, evidently assuming that commercially available products, such as phosphate-buffered saline or ultrapure distilled water, are particulate-free. Similarly, positive controls or size standards are seldom reported by researchers to verify particle sizing. The Stokes-Einstein equation incorporates sample viscosity and temperature variables to determine particle displacement. Reporting the stable laser chamber temperature during the entire sample video collection is, therefore, an essential control measure for accurate replication. The filtration of samples or diluents is also not routinely reported, and if so, the specifics of the filter (manufacturer, membrane material, pore size) and storage conditions are seldom included. The International Society for Extracellular Vesicle (ISEV)'s minimal standards of acceptable experimental detail should include a well-documented NTA protocol for the characterization of EVs. The following experiment provides evidence that an NTA analysis protocol needs to be established by the individual researcher and included in the methods of publications that use NTA characterization as one of the options to fulfill MISEV2018 requirements for single vesicle characterization.

摘要

纳米颗粒跟踪分析(NTA)自 2006 年以来一直是几种用于细胞外囊泡(EV)研究的表征方法之一。许多人认为,NTA 仪器及其软件包可以在经过最少的培训后轻松使用,并且可以在内部进行尺寸校准。由于 NTA 采集和软件分析都构成了 EV 的特征描述,因此它们被纳入了 2018 年细胞外囊泡研究的最低信息要求(MISEV2018)。此外,它们还通过透明报告和细胞外囊泡研究知识集中(EV-TRACK)进行了监测,以提高 EV 实验的稳健性(例如,由于不受控制的因素而最小化实验变化)。尽管努力鼓励报告方法和对照,但许多已发表的研究论文未能报告重现原始 NTA 观察所需的关键设置。很少有论文报告 NTA 对阴性对照或稀释剂的表征,显然是假设市售产品(如磷酸盐缓冲盐水或超纯水)是无颗粒的。同样,研究人员很少报告阳性对照或尺寸标准来验证颗粒尺寸。Stokes-Einstein 方程将样品粘度和温度变量纳入其中,以确定颗粒位移。因此,在整个样品视频采集过程中报告稳定的激光腔温度是准确复制的重要控制措施。样品或稀释剂的过滤也没有常规报告,如果有,也很少包括过滤器(制造商、膜材料、孔径)和存储条件的具体信息。国际细胞外囊泡学会(ISEV)可接受实验细节的最低标准应包括一份经过充分记录的 NTA 协议,用于 EV 的特征描述。以下实验提供的证据表明,需要由个别研究人员建立 NTA 分析协议,并将其纳入使用 NTA 特征描述作为满足 MISEV2018 对单个囊泡特征描述要求的选项之一的出版物的方法中。

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