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探究癌症生物学的临床前可重复性。

Investigating the replicability of preclinical cancer biology.

机构信息

Center for Open Science, Charlottesville, United States.

Quantitative Sciences Unit, Stanford University, Stanford, United States.

出版信息

Elife. 2021 Dec 7;10:e71601. doi: 10.7554/eLife.71601.

Abstract

Replicability is an important feature of scientific research, but aspects of contemporary research culture, such as an emphasis on novelty, can make replicability seem less important than it should be. The Reproducibility Project: Cancer Biology was set up to provide evidence about the replicability of preclinical research in cancer biology by repeating selected experiments from high-impact papers. A total of 50 experiments from 23 papers were repeated, generating data about the replicability of a total of 158 effects. Most of the original effects were positive effects (136), with the rest being null effects (22). A majority of the original effect sizes were reported as numerical values (117), with the rest being reported as representative images (41). We employed seven methods to assess replicability, and some of these methods were not suitable for all the effects in our sample. One method compared effect sizes: for positive effects, the median effect size in the replications was 85% smaller than the median effect size in the original experiments, and 92% of replication effect sizes were smaller than the original. The other methods were binary - the replication was either a success or a failure - and five of these methods could be used to assess both positive and null effects when effect sizes were reported as numerical values. For positive effects, 40% of replications (39/97) succeeded according to three or more of these five methods, and for null effects 80% of replications (12/15) were successful on this basis; combining positive and null effects, the success rate was 46% (51/112). A successful replication does not definitively confirm an original finding or its theoretical interpretation. Equally, a failure to replicate does not disconfirm a finding, but it does suggest that additional investigation is needed to establish its reliability.

摘要

可重复性是科学研究的一个重要特征,但是当代研究文化的某些方面,例如强调新颖性,可能会使可重复性显得不如应有的重要。《癌症生物学可重复性研究》项目旨在通过重复高影响力论文中的选定实验,为癌症生物学的临床前研究的可重复性提供证据。共有 23 篇论文中的 50 个实验被重复,总共产生了 158 个效应的可重复性数据。大多数原始效应是阳性效应(136 个),其余的是零效应(22 个)。大多数原始效应大小以数值形式报告(117 个),其余以代表性图像形式报告(41 个)。我们采用了七种方法来评估可重复性,其中一些方法不适合我们样本中的所有效应。一种方法比较了效应大小:对于阳性效应,重复实验中的中位效应大小比原始实验中的中位效应小 85%,92%的重复效应大小小于原始效应。其他方法是二进制的——复制要么成功,要么失败——当效应大小以数值形式报告时,其中五种方法可以用于评估阳性和零效应。对于阳性效应,根据这五种方法中的三种或更多种方法,有 40%的重复实验(39/97)成功,对于零效应,有 80%的重复实验(12/15)成功;将阳性和零效应结合起来,成功率为 46%(51/112)。一个成功的复制并不能确定原始发现或其理论解释的正确性。同样,未能复制也不能否定一个发现,但它确实表明需要进一步调查以确定其可靠性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ecc7/8651293/a2fb417b72c2/elife-71601-fig1.jpg

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