Division of Scientific Computing, Department of Information Technology, Uppsala University, 751 05, Uppsala, Sweden.
J Math Biol. 2021 Dec 8;83(6-7):75. doi: 10.1007/s00285-021-01697-w.
In certain discrete models of populations of biological cells, the mechanical forces between the cells are center based or vertex based on the microscopic level where each cell is individually represented. The cells are circular or spherical in a center based model and polygonal or polyhedral in a vertex based model. On a higher, macroscopic level, the time evolution of the density of the cells is described by partial differential equations (PDEs). We derive relations between the modelling on the micro and macro levels in one, two, and three dimensions by regarding the micro model as a discretization of a PDE for conservation of mass on the macro level. The forces in the micro model correspond on the macro level to a gradient of the pressure scaled by quantities depending on the cell geometry. The two levels of modelling are compared in numerical experiments in one and two dimensions.
在生物细胞群体的某些离散模型中,细胞之间的机械力是基于中心的或基于顶点的,这取决于微观层面,在微观层面上,每个细胞都被单独表示。在基于中心的模型中,细胞是圆形或球形的,而在基于顶点的模型中,细胞是多边形或多面体的。在更高的宏观层面上,细胞密度的时间演化由偏微分方程 (PDE) 描述。我们通过将微观模型视为宏观水平上质量守恒 PDE 的离散化,在一维、二维和三维中推导出微观和宏观模型之间的关系。微观模型中的力在宏观水平上对应于压力梯度,其大小由取决于细胞几何形状的量来缩放。在一维和二维的数值实验中比较了这两个层次的建模。