Li Fang-Wei, Luo Sheng-Kang
Department of Plastic and Reconstructive Surgery, Guangdong Second Provincial General Hospital, Guangzhou City, Guangdong Province, 510317, People's Republic of China.
Int J Gen Med. 2021 Dec 1;14:9227-9235. doi: 10.2147/IJGM.S340025. eCollection 2021.
The occurrence and development mechanisms of melanoma are related to immunity and lncRNAs. Therefore, it is necessary to systematically explore immune-related lncRNA profiles to help improve the prognosis of melanoma.
We integrated immune-related lncRNAs and the basic clinical information of melanoma patients in the TCGA dataset. Immune-associated lncRNAs were selected by differential expression screening and enriched for analysis. After univariate and multivariate Cox regression analyses, a new prognostic indicator based on immune-associated lncRNAs was established.
Overall, differentially expressed immune-related lncRNAs were significantly associated with clinical outcomes in patients with melanoma. A prognostic model was then established based on 14 immune-associated lncRNAs (LRRC8C-DT, AC021188.1, MALINC1, CCR5AS, EIF2AK3-DT, AC022306.2, AC242842.1, AL034376.1, AL662844.4, AC009065.3, AC099811.3, AC125807.2, SPINT1-AS1 and AC009495.2). Melanoma patients in the high-risk group had worse overall survival than those in the low-risk group. The AUC of the risk score was 0.786.
This study identified several clinically significant immune-related lncRNAs and established a relevant prognostic model, which provided a molecular analysis of immunity in melanoma and potential prognostic lncRNAs for melanoma.
黑色素瘤的发生发展机制与免疫及长链非编码RNA(lncRNA)相关。因此,有必要系统地探索免疫相关lncRNA谱,以帮助改善黑色素瘤的预后。
我们整合了TCGA数据集中免疫相关lncRNA和黑色素瘤患者的基本临床信息。通过差异表达筛选选择免疫相关lncRNA,并进行富集分析。经过单因素和多因素Cox回归分析,建立了基于免疫相关lncRNA的新预后指标。
总体而言,差异表达的免疫相关lncRNA与黑色素瘤患者的临床结局显著相关。然后基于14种免疫相关lncRNA(LRRC8C-DT、AC021188.1、MALINC1、CCR5AS、EIF2AK3-DT、AC022306.2、AC242842.1、AL034376.1、AL662844.4、AC009065.3、AC099811.3、AC125807.2、SPINT1-AS1和AC009495.2)建立了预后模型。高危组黑色素瘤患者的总生存期低于低危组。风险评分的曲线下面积为0.786。
本研究鉴定了几种具有临床意义的免疫相关lncRNA,并建立了相关预后模型,为黑色素瘤的免疫分子分析及潜在的预后lncRNA提供了依据。