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口腔和单核细胞中 DNA 甲基化生物标志物的表观基因组关联研究在女性类风湿关节炎中的应用。

Epigenome association study for DNA methylation biomarkers in buccal and monocyte cells for female rheumatoid arthritis.

机构信息

Arthritis Northwest, 105 W 8th Ave #6080, Spokane, WA, 99204, USA.

Center for Reproductive Biology, School of Biological Sciences, Washington State University, Pullman, WA, 99164-4236, USA.

出版信息

Sci Rep. 2021 Dec 10;11(1):23789. doi: 10.1038/s41598-021-03170-6.

Abstract

Genetics (i.e., mutations) has been assumed to be the major factor in rheumatoid arthritis (RA) etiology, but accounts for a minority of the variance in disease risk for RA. In contrast to genetics, the environment can have dramatic impacts on epigenetics that associate with disease etiology. The current study used buccal cells and purified blood monocytes from two different clinical cohorts involving Caucasian or African American female populations with or without arthritis. The differential DNA methylation regions (DMRs) between the control and RA populations were identified with an epigenome-wide association study. The DMRs (i.e., epimutations) identified in the buccal cells and monocytes were found to be distinct. The DMR associated genes were identified and many have previously been shown to be associated with arthritis. Observations demonstrate DNA methylation epimutation RA biomarkers are cell type specific and similar findings were observed with the two racial background populations. Rheumatoid arthritis susceptibility epigenetic diagnosis appears feasible and may improve the clinical management of RA and allowpreventative medicine considerations.

摘要

遗传学(即突变)被认为是类风湿关节炎(RA)发病机制的主要因素,但仅能解释 RA 疾病风险的一小部分差异。与遗传学不同,环境可以对与疾病发病机制相关的表观遗传学产生巨大影响。本研究使用颊细胞和纯化的血液单核细胞,来自两个不同的临床队列,涉及有或没有关节炎的白种人或非裔美国人女性人群。通过全基因组关联研究确定了对照和 RA 人群之间的差异 DNA 甲基化区域(DMR)。在颊细胞和单核细胞中鉴定出的 DMR(即表观突变)是不同的。鉴定出与 DMR 相关的基因,其中许多先前已被证明与关节炎有关。这些观察结果表明,DNA 甲基化表观突变 RA 生物标志物是细胞类型特异性的,并且在两个种族背景人群中也观察到了类似的发现。类风湿关节炎易感性表观遗传学诊断似乎是可行的,可能改善 RA 的临床管理,并允许考虑预防医学。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b794/8664902/a8ecd01e356f/41598_2021_3170_Fig1_HTML.jpg

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