Mai Jiantao, Liao Lingling, Ling Rongsong, Guo Xiaolong, Lin Jingying, Mo Beixin, Chen Weizhao, Yu Yu
Guangdong Provincial Key Laboratory for Plant Epigenetics, Longhua Bioindustry and Innovation Research Institute, College of Life Sciences and Oceanography, Shenzhen University, 1066 Xueyuan Avenue, Shenzhen, 518000, PR China.
Institute for Advanced Study, Shenzhen University, 3688 Nanhai Avenue, Shenzhen, 518000, PR China.
Synth Syst Biotechnol. 2021 Nov 27;6(4):437-445. doi: 10.1016/j.synbio.2021.11.005. eCollection 2021 Dec.
The invasive plant Kunth () from South America poses a significant threat to the stability and biodiversity of ecosystems. However, an effective and economical method to control is still lacking. RNA interference (RNAi) has been widely studied and applied in agriculture for trait improvement. Spray-induced gene silencing (SIGS) can produce RNAi silencing effects without introducing heritable modifications to the plant genome and is becoming a novel nontransformation strategy for plant protection. In this study, the genes encoding chlorophyll a/b-binding proteins were selected as targets of RNAi, based on high-throughput sequencing of transcriptome and bioinformatic analyses of sequence specificity. Three types of RNAi molecules, double-stranded RNA, RNAi nanomicrosphere, and short hairpin RNA (shRNA), with their corresponding short interfering RNA sequences were designed and synthesized for SIGS vector construction, from which each RNAi molecule was transcribed and extracted to be sprayed on leaves. Whereas water-treated control leaves remained green, leaves treated with RNAi molecules turned yellow and eventually wilted. Quantitative real-time PCR showed that the expression levels of target genes were significantly reduced in the RNAi-treated groups compared with those of the control, suggesting that all three types of RNAi herbicides effectively silenced the endogenous target genes, which are essential for the growth of . We also found that shRNA showed better silencing efficiency than the other two molecules. Taken together, our study successfully designed three types of RNAi-based herbicides that specifically silenced endogenous target genes and controlled the growth of Moreover, we identified a gene family encoding chlorophyll a/b-binding proteins that is important for the growth and development of and could serve as potential targets for controlling the spread of
来自南美洲的入侵植物昆氏(学名)对生态系统的稳定性和生物多样性构成了重大威胁。然而,目前仍缺乏一种有效且经济的控制该植物的方法。RNA干扰(RNAi)已在农业中被广泛研究并应用于性状改良。喷雾诱导基因沉默(SIGS)能够产生RNAi沉默效应,而无需对植物基因组进行可遗传修饰,并且正成为一种新型的植物保护非转化策略。在本研究中,基于该植物转录组的高通量测序以及序列特异性的生物信息学分析,选择编码叶绿素a/b结合蛋白的基因作为RNAi的靶标。设计并合成了三种类型的RNAi分子,即双链RNA、RNAi纳米微球和短发夹RNA(shRNA),以及它们相应的短干扰RNA序列用于构建SIGS载体,从该载体中转录并提取每种RNAi分子,然后喷洒在该植物的叶片上。用水处理的对照叶片保持绿色,而用RNAi分子处理的叶片变黄并最终枯萎。定量实时PCR表明,与对照组相比,RNAi处理组中靶基因的表达水平显著降低,这表明所有三种类型的RNAi除草剂均有效地沉默了该植物生长所必需的内源性靶基因。我们还发现shRNA表现出比其他两种分子更好的沉默效率。综上所述,我们的研究成功设计了三种基于RNAi的除草剂,它们特异性地沉默内源性靶基因并控制了该植物的生长。此外,我们鉴定出一个编码叶绿素a/b结合蛋白的基因家族,该家族对该植物的生长和发育很重要,并且可作为控制该植物扩散的潜在靶标。