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RNA测序分析揭示柠檬醛通过调节几丁质含量发挥抗真菌作用。

The Antifungal Effects of Citral on Occur via Modulation of Chitin Content as Revealed by RNA-Seq Analysis.

作者信息

Song Xingchen, Zhao Qijun, Zhou Aiai, Wen Xiaodong, Li Ming, Li Rongyu, Liao Xun, Xu Tengzhi

机构信息

Institute of Crop Protection, Guizhou University, Guiyang 550025, China.

College of Agriculture, Guizhou University, Guiyang 550025, China.

出版信息

J Fungi (Basel). 2021 Nov 29;7(12):1023. doi: 10.3390/jof7121023.

Abstract

The natural product citral has previously been demonstrated to possess antifungal activity against . The purpose of this study was to screen and annotate genes that were differentially expressed (DEGs) in after treatment with citral using RNA sequencing (RNA-seq). Thereafter, samples were reprepared for quantitative real-time PCR (RT-qPCR) analysis verification of RNA-seq data. The results showed that 649 DEGs in were significantly affected after treatment with citral (100 μg/mL) for 24 h. Kyoto Encyclopedia of Genes and Genomes (KEGG) and a gene ontology (GO) analysis showed that DEGs were mainly enriched in amino sugar and nucleotide sugar metabolic pathways, including the chitin synthesis pathway and UDP sugar synthesis pathway. The results of the RT-qPCR analysis also showed that the chitin present in might be degraded to chitosan, chitobiose, N-acetyl-D-glucosamine, and β-D-fructose-6-phosphate following treatment with citral. Chitin degradation was indicated by damaged cell-wall integrity. Moreover, the UDP glucose synthesis pathway was involved in glycolysis and gluconeogenesis, providing precursors for the synthesis of polysaccharides. Galactose-1-phosphate uridylyltransferase, which is involved in the regulation of UDP-α-D-galactose and α-D-galactose-1-phosphate, was downregulated. This would result in the inhibition of UDP glucose (UDP-Glc) synthesis, a reduction in cell-wall glucan content, and the destruction of cell-wall integrity.

摘要

天然产物柠檬醛先前已被证明对……具有抗真菌活性。本研究的目的是使用RNA测序(RNA-seq)筛选和注释经柠檬醛处理后的……中差异表达的基因(DEGs)。此后,重新制备样本用于定量实时PCR(RT-qPCR)分析以验证RNA-seq数据。结果表明,用100μg/mL柠檬醛处理24小时后,……中的649个DEGs受到显著影响。京都基因与基因组百科全书(KEGG)和基因本体论(GO)分析表明,DEGs主要富集在氨基糖和核苷酸糖代谢途径中,包括几丁质合成途径和UDP糖合成途径。RT-qPCR分析结果还表明,……中存在的几丁质在用柠檬醛处理后可能会降解为壳聚糖、壳二糖、N-乙酰-D-葡萄糖胺和β-D-果糖-6-磷酸。几丁质降解表现为细胞壁完整性受损。此外,UDP葡萄糖合成途径参与糖酵解和糖异生,为多糖合成提供前体。参与UDP-α-D-半乳糖和α-D-半乳糖-1-磷酸调节的半乳糖-1-磷酸尿苷转移酶下调。这将导致UDP葡萄糖(UDP-Glc)合成受到抑制,细胞壁葡聚糖含量降低,以及细胞壁完整性遭到破坏。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/337c/8704549/11b2bbd1d496/jof-07-01023-g001.jpg

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